HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:45.8 nTPM
HPA Brain:126.1 nTPM
GTEx:45.8 nTPM
FANTOM5:74.1 Scaled Tags Per Million
Pig:52.5 nTPM
Mouse:41.2 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030991Antibody HPA076420Antibody CAB019400
Glial cells Not detectedNot detectedLow
Neuronal cells MediumMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 126.1
Sample id Sample description nTPM
Hippocampus
nTPM: 100.5
2529 Female, age 94, left hemisphere 132.9
2621 Female, age 67, right hemisphere 125.2
2148 Female, age 91, left hemisphere 97.1
1911 Female, age 85, right hemisphere 96.1
1898 Male, age 80, left hemisphere 84.2
1855 Male, age 76, left hemisphere 67.1
Dentate gyrus
nTPM: 94.7
2531 Female, age 67, both hemispheres 111.8
1927 Female, age 91, both hemispheres 95.1
2530 Female, age 94, left hemisphere 94.0
2010 Male, age 76, both hemispheres 89.4
2528 Male, age 74, both hemispheres 89.4
2246 Female, age 85, both hemispheres 88.3
Entorhinal gyrus
nTPM: 126.1
2613 Female, age 94, left hemisphere 171.4
2686 Male, age 75, right hemisphere 130.9
2764 Male, age 80, right hemisphere 130.9
1938 Female, age 85, left hemisphere 110.4
1787 Male, age 76, left hemisphere 109.8
2117 Female, age 91, right hemisphere 103.3
Hippocampus, CA1
nTPM: 85.1
2527 Male, age 74, both hemispheres 92.4
2045 Male, age 76, both hemispheres 88.2
1873 Female, age 85, both hemispheres 81.9
2082 Female, age 91, right hemisphere 81.7
2749 Male, age 80, left hemisphere 81.1
Hippocampus, CA2
nTPM: 96.1
1963 Male, age 80, left hemisphere 123.0
2437 Female, age 94, left hemisphere 119.8
1940 Female, age 85, left hemisphere 89.7
2113 Female, age 91, right hemisphere 89.0
1892 Male, age 76, both hemispheres 83.4
2249 Male, age 74, both hemispheres 71.9
Hippocampus, CA3
nTPM: 96.3
2861 Female, age 67, both hemispheres 114.6
2620 Female, age 94, left hemisphere 113.6
1891 Female, age 85, both hemispheres 99.0
1867 Male, age 76, both hemispheres 90.2
2137 Male, age 80, left hemisphere 88.5
2436 Male, age 74, both hemispheres 71.9
Parahippocampal cortex
nTPM: 116.5
2622 Female, age 67, right hemisphere 151.4
2692 Male, age 74, both hemispheres 134.1
1990 Female, age 91, right hemisphere 121.7
2245 Female, age 91, both hemispheres 121.0
2532 Female, age 72, left hemisphere 120.5
2250 Female, age 67, right hemisphere 107.3
1933 Female, age 85, both hemispheres 107.2
2693 Female, age 94, both hemispheres 105.8
2018 Male, age 76, both hemispheres 99.4
1850 Male, age 80, both hemispheres 96.4
Perirhinal gyrus
nTPM: 102.5
1847 Female, age 91, left hemisphere 109.9
1794 Male, age 80, right hemisphere 105.2
2521 Female, age 94, right hemisphere 101.8
1841 Female, age 85, right hemisphere 98.3
2848 Male, age 76, right hemisphere 97.3
Subiculum
nTPM: 109.0
2619 Male, age 74, both hemispheres 148.4
1977 Female, age 85, both hemispheres 112.8
2042 Male, age 76, both hemispheres 110.4
2438 Female, age 94, left hemisphere 102.9
1901 Male, age 80, both hemispheres 96.1
2729 Female, age 91, right hemisphere 83.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.8
Samples: 197

Max nTPM: 114.5
Min nTPM: 14.2
Std nTPM: 16.5
Median nTPM: 41.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 114.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 106.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 99.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 93.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 85.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 81.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 79.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 76.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 76.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 75.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 75.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.1
FF:10153-102I9 76 years, female 105.7
FF:10169-103B7 60 years, female 42.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.5
Pig sample Sample description nTPM
Subiculum
nTPM: 49.8
Samples: 4

Max nTPM: 65.8
Min nTPM: 42.5
Sample A Female 65.8
Sample B Female 46.2
Sample C Male 44.7
Sample D Male 42.5
Dorsal hippocampus
nTPM: 39.4
Samples: 4

Max nTPM: 45.9
Min nTPM: 29.9
Sample A Female 45.9
Sample B Female 35.7
Sample C Male 45.9
Sample D Male 29.9
Entorhinal cortex
nTPM: 52.5
Samples: 4

Max nTPM: 60.0
Min nTPM: 48.1
Sample A Female 50.2
Sample B Female 48.1
Sample C Male 60.0
Sample D Male 51.8
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 53.8
Min nTPM: 32.5
Sample A Female 33.4
Sample B Female 32.5
Sample C Male 53.8
Sample D Male 47.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 41.9
Min nTPM: 40.4
Sample A Male 40.4
Sample B Male 41.9
Sample C Female 41.9
Sample D Female 40.7
Hippocampal formation
nTPM: 39.8
Samples: 4

Max nTPM: 43.3
Min nTPM: 35.7
Sample A Male 43.3
Sample B Male 37.5
Sample C Female 35.7
Sample D Female 42.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
69734965 Antisense, RP_050503_01_G09, Mouse strain C57BL/6J (56 days, male) 3.0

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