HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:31.3 nTPM
HPA Brain:16.9 nTPM
GTEx:31.3 nTPM
FANTOM5:22.4 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:17.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057888
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
1898 Male, age 80, left hemisphere 18.6
1911 Female, age 85, right hemisphere 16.9
2529 Female, age 94, left hemisphere 16.0
2148 Female, age 91, left hemisphere 15.3
2621 Female, age 67, right hemisphere 13.3
1855 Male, age 76, left hemisphere 12.4
Dentate gyrus
nTPM: 14.9
1927 Female, age 91, both hemispheres 17.2
2528 Male, age 74, both hemispheres 17.0
2010 Male, age 76, both hemispheres 15.1
2246 Female, age 85, both hemispheres 14.9
2530 Female, age 94, left hemisphere 12.8
2531 Female, age 67, both hemispheres 12.3
Entorhinal gyrus
nTPM: 14.2
1787 Male, age 76, left hemisphere 16.1
1938 Female, age 85, left hemisphere 14.8
2117 Female, age 91, right hemisphere 14.3
2686 Male, age 75, right hemisphere 13.6
2613 Female, age 94, left hemisphere 13.3
2764 Male, age 80, right hemisphere 12.9
Hippocampus, CA1
nTPM: 16.3
2749 Male, age 80, left hemisphere 23.3
1873 Female, age 85, both hemispheres 15.1
2082 Female, age 91, right hemisphere 14.9
2527 Male, age 74, both hemispheres 14.5
2045 Male, age 76, both hemispheres 13.9
Hippocampus, CA2
nTPM: 16.8
1963 Male, age 80, left hemisphere 18.4
1940 Female, age 85, left hemisphere 17.9
2249 Male, age 74, both hemispheres 17.3
1892 Male, age 76, both hemispheres 16.9
2437 Female, age 94, left hemisphere 15.2
2113 Female, age 91, right hemisphere 15.0
Hippocampus, CA3
nTPM: 16.9
2137 Male, age 80, left hemisphere 22.5
1867 Male, age 76, both hemispheres 18.0
2620 Female, age 94, left hemisphere 16.7
2436 Male, age 74, both hemispheres 16.2
1891 Female, age 85, both hemispheres 14.0
2861 Female, age 67, both hemispheres 14.0
Parahippocampal cortex
nTPM: 13.1
2245 Female, age 91, both hemispheres 15.2
2018 Male, age 76, both hemispheres 14.9
2250 Female, age 67, right hemisphere 14.4
1990 Female, age 91, right hemisphere 14.0
1850 Male, age 80, both hemispheres 13.7
1933 Female, age 85, both hemispheres 13.6
2692 Male, age 74, both hemispheres 12.5
2693 Female, age 94, both hemispheres 11.4
2532 Female, age 72, left hemisphere 10.6
2622 Female, age 67, right hemisphere 10.6
Perirhinal gyrus
nTPM: 14.5
1847 Female, age 91, left hemisphere 17.0
1794 Male, age 80, right hemisphere 16.0
1841 Female, age 85, right hemisphere 15.5
2848 Male, age 76, right hemisphere 12.1
2521 Female, age 94, right hemisphere 11.9
Subiculum
nTPM: 15.5
1901 Male, age 80, both hemispheres 18.6
2042 Male, age 76, both hemispheres 16.6
2619 Male, age 74, both hemispheres 15.1
1977 Female, age 85, both hemispheres 14.4
2438 Female, age 94, left hemisphere 14.4
2729 Female, age 91, right hemisphere 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.3
Samples: 197

Max nTPM: 64.9
Min nTPM: 14.6
Std nTPM: 8.1
Median nTPM: 30.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 64.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 63.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 52.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 52.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 51.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 51.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 51.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 51.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 50.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 46.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.4
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.4
Pig sample Sample description nTPM
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 27.5
Min nTPM: 15.8
Sample A Female 27.5
Sample B Female 20.6
Sample C Male 15.8
Sample D Male 17.1
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 31.8
Min nTPM: 18.3
Sample A Female 31.8
Sample B Female 22.5
Sample C Male 24.9
Sample D Male 18.3
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 25.4
Min nTPM: 15.9
Sample A Female 21.4
Sample B Female 25.4
Sample C Male 20.2
Sample D Male 15.9
Ventral hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 28.6
Min nTPM: 16.1
Sample A Female 21.9
Sample B Female 16.1
Sample C Male 28.6
Sample D Male 19.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 20.0
Min nTPM: 11.7
Sample A Male 20.0
Sample B Male 15.8
Sample C Female 17.5
Sample D Female 11.7
Hippocampal formation
nTPM: 17.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 15.2
Sample A Male 18.1
Sample B Male 15.2
Sample C Female 17.1
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68162257 Antisense, RP_041122_02_F02, Mouse strain C57BL/6J (56 days, male) 0.5

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