HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:168.7 nTPM
HPA Brain:197.9 nTPM
GTEx:168.7 nTPM
FANTOM5:259.1 Scaled Tags Per Million
Pig:255.0 nTPM
Mouse:461.2 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044803
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 197.9
Sample id Sample description nTPM
Hippocampus
nTPM: 156.8
1898 Male, age 80, left hemisphere 209.1
1855 Male, age 76, left hemisphere 167.9
2621 Female, age 67, right hemisphere 161.5
1911 Female, age 85, right hemisphere 154.5
2529 Female, age 94, left hemisphere 131.8
2148 Female, age 91, left hemisphere 116.1
Dentate gyrus
nTPM: 155.8
1927 Female, age 91, both hemispheres 198.8
2010 Male, age 76, both hemispheres 189.7
2246 Female, age 85, both hemispheres 165.6
2530 Female, age 94, left hemisphere 141.6
2531 Female, age 67, both hemispheres 127.4
2528 Male, age 74, both hemispheres 111.7
Entorhinal gyrus
nTPM: 151.5
1938 Female, age 85, left hemisphere 179.8
2613 Female, age 94, left hemisphere 166.7
1787 Male, age 76, left hemisphere 163.9
2764 Male, age 80, right hemisphere 155.6
2686 Male, age 75, right hemisphere 126.3
2117 Female, age 91, right hemisphere 117.0
Hippocampus, CA1
nTPM: 181.4
2749 Male, age 80, left hemisphere 260.0
1873 Female, age 85, both hemispheres 195.1
2045 Male, age 76, both hemispheres 176.9
2527 Male, age 74, both hemispheres 145.7
2082 Female, age 91, right hemisphere 129.1
Hippocampus, CA2
nTPM: 157.7
1892 Male, age 76, both hemispheres 223.1
1963 Male, age 80, left hemisphere 167.6
2249 Male, age 74, both hemispheres 160.9
2437 Female, age 94, left hemisphere 137.9
1940 Female, age 85, left hemisphere 136.7
2113 Female, age 91, right hemisphere 120.1
Hippocampus, CA3
nTPM: 170.0
2137 Male, age 80, left hemisphere 228.2
1867 Male, age 76, both hemispheres 193.5
2436 Male, age 74, both hemispheres 179.4
1891 Female, age 85, both hemispheres 160.7
2620 Female, age 94, left hemisphere 155.2
2861 Female, age 67, both hemispheres 102.8
Parahippocampal cortex
nTPM: 155.2
1850 Male, age 80, both hemispheres 205.3
2018 Male, age 76, both hemispheres 172.1
1933 Female, age 85, both hemispheres 170.4
2245 Female, age 91, both hemispheres 162.6
2532 Female, age 72, left hemisphere 161.2
1990 Female, age 91, right hemisphere 158.2
2250 Female, age 67, right hemisphere 157.1
2693 Female, age 94, both hemispheres 146.7
2692 Male, age 74, both hemispheres 112.2
2622 Female, age 67, right hemisphere 106.3
Perirhinal gyrus
nTPM: 197.9
1847 Female, age 91, left hemisphere 227.4
1794 Male, age 80, right hemisphere 216.7
1841 Female, age 85, right hemisphere 215.5
2848 Male, age 76, right hemisphere 169.0
2521 Female, age 94, right hemisphere 160.8
Subiculum
nTPM: 153.7
1901 Male, age 80, both hemispheres 182.8
2042 Male, age 76, both hemispheres 167.5
1977 Female, age 85, both hemispheres 166.1
2438 Female, age 94, left hemisphere 157.6
2619 Male, age 74, both hemispheres 130.4
2729 Female, age 91, right hemisphere 117.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 168.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 168.7
Samples: 197

Max nTPM: 349.5
Min nTPM: 90.2
Std nTPM: 49.5
Median nTPM: 160.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 349.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 300.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 298.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 293.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 289.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 287.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 276.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 265.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 252.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 249.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 249.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 259.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 259.1
FF:10169-103B7 60 years, female 351.0
FF:10153-102I9 76 years, female 167.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 255.0
Pig sample Sample description nTPM
Subiculum
nTPM: 228.6
Samples: 4

Max nTPM: 279.5
Min nTPM: 201.1
Sample A Female 279.5
Sample B Female 204.2
Sample C Male 229.4
Sample D Male 201.1
Dorsal hippocampus
nTPM: 255.0
Samples: 4

Max nTPM: 304.1
Min nTPM: 200.1
Sample A Female 304.1
Sample B Female 268.6
Sample C Male 247.3
Sample D Male 200.1
Entorhinal cortex
nTPM: 237.2
Samples: 4

Max nTPM: 257.1
Min nTPM: 210.3
Sample A Female 257.1
Sample B Female 253.8
Sample C Male 227.6
Sample D Male 210.3
Ventral hippocampus
nTPM: 228.4
Samples: 4

Max nTPM: 268.5
Min nTPM: 170.6
Sample A Female 244.7
Sample B Female 170.6
Sample C Male 229.8
Sample D Male 268.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 461.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 386.1
Samples: 4

Max nTPM: 408.5
Min nTPM: 361.2
Sample A Male 366.9
Sample B Male 407.8
Sample C Female 408.5
Sample D Female 361.2
Hippocampal formation
nTPM: 461.2
Samples: 4

Max nTPM: 509.6
Min nTPM: 427.0
Sample A Male 509.6
Sample B Male 445.4
Sample C Female 427.0
Sample D Female 462.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
73512529 Antisense, RP_050913_01_A05, Mouse strain C57BL/6J (56 days, male) 0.8

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