HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:2.6 nTPM
HPA Brain:31.9 nTPM
GTEx:2.6 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:4.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037681Antibody HPA037682
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.8
2148 Female, age 91, left hemisphere 40.4
1855 Male, age 76, left hemisphere 28.7
2529 Female, age 94, left hemisphere 28.5
2621 Female, age 67, right hemisphere 28.4
1911 Female, age 85, right hemisphere 23.8
1898 Male, age 80, left hemisphere 22.8
Dentate gyrus
nTPM: 30.6
2531 Female, age 67, both hemispheres 44.7
1927 Female, age 91, both hemispheres 37.5
2528 Male, age 74, both hemispheres 32.5
2246 Female, age 85, both hemispheres 29.9
2010 Male, age 76, both hemispheres 21.5
2530 Female, age 94, left hemisphere 17.5
Entorhinal gyrus
nTPM: 21.7
2686 Male, age 75, right hemisphere 30.1
2764 Male, age 80, right hemisphere 23.1
1787 Male, age 76, left hemisphere 23.0
2117 Female, age 91, right hemisphere 19.8
2613 Female, age 94, left hemisphere 17.4
1938 Female, age 85, left hemisphere 16.7
Hippocampus, CA1
nTPM: 30.2
2045 Male, age 76, both hemispheres 54.1
1873 Female, age 85, both hemispheres 32.4
2527 Male, age 74, both hemispheres 27.1
2082 Female, age 91, right hemisphere 25.1
2749 Male, age 80, left hemisphere 12.5
Hippocampus, CA2
nTPM: 24.2
1940 Female, age 85, left hemisphere 29.8
1892 Male, age 76, both hemispheres 26.6
2113 Female, age 91, right hemisphere 26.2
2437 Female, age 94, left hemisphere 24.8
1963 Male, age 80, left hemisphere 19.3
2249 Male, age 74, both hemispheres 18.6
Hippocampus, CA3
nTPM: 29.8
2620 Female, age 94, left hemisphere 46.6
2861 Female, age 67, both hemispheres 38.4
1891 Female, age 85, both hemispheres 27.4
1867 Male, age 76, both hemispheres 25.5
2436 Male, age 74, both hemispheres 21.8
2137 Male, age 80, left hemisphere 18.9
Parahippocampal cortex
nTPM: 27.1
2693 Female, age 94, both hemispheres 36.4
2250 Female, age 67, right hemisphere 31.0
2622 Female, age 67, right hemisphere 31.0
2245 Female, age 91, both hemispheres 30.2
1850 Male, age 80, both hemispheres 28.2
2532 Female, age 72, left hemisphere 25.2
1933 Female, age 85, both hemispheres 24.4
2018 Male, age 76, both hemispheres 23.6
2692 Male, age 74, both hemispheres 21.5
1990 Female, age 91, right hemisphere 19.6
Perirhinal gyrus
nTPM: 31.9
2521 Female, age 94, right hemisphere 42.8
1794 Male, age 80, right hemisphere 32.3
1847 Female, age 91, left hemisphere 30.0
1841 Female, age 85, right hemisphere 27.1
2848 Male, age 76, right hemisphere 27.0
Subiculum
nTPM: 24.5
2729 Female, age 91, right hemisphere 37.1
1977 Female, age 85, both hemispheres 32.2
2619 Male, age 74, both hemispheres 24.5
2438 Female, age 94, left hemisphere 21.9
1901 Male, age 80, both hemispheres 18.3
2042 Male, age 76, both hemispheres 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.6
Samples: 197

Max nTPM: 7.5
Min nTPM: 0.5
Std nTPM: 1.2
Median nTPM: 2.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 7.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 6.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 6.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 6.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 6.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 5.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 5.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 5.2
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 5.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 5.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 4.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 17.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Subiculum
nTPM: 12.8
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.1
Sample A Female 14.4
Sample B Female 11.3
Sample C Male 10.1
Sample D Male 15.3
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 17.1
Min nTPM: 9.7
Sample A Female 12.1
Sample B Female 11.1
Sample C Male 9.7
Sample D Male 17.1
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 13.9
Min nTPM: 10.3
Sample A Female 13.1
Sample B Female 13.9
Sample C Male 12.2
Sample D Male 10.3
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.0
Sample A Female 9.2
Sample B Female 12.2
Sample C Male 9.0
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 7.0
Min nTPM: 3.4
Sample A Male 3.8
Sample B Male 3.4
Sample C Female 4.1
Sample D Female 7.0
Hippocampal formation
nTPM: 3.5
Samples: 4

Max nTPM: 3.7
Min nTPM: 3.0
Sample A Male 3.5
Sample B Male 3.7
Sample C Female 3.7
Sample D Female 3.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
72080054 Antisense, RP_051017_03_C01, Mouse strain C57BL/6J (56 days, male) 1.2
68919886 Antisense, RP_050301_02_F12, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org