HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:4.7 nTPM
HPA Brain:24.8 nTPM
GTEx:4.7 nTPM
FANTOM5:0.7 Scaled Tags Per Million
Mouse:32.7 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 5.9
1898 Male, age 80, left hemisphere 10.0
1855 Male, age 76, left hemisphere 6.5
2621 Female, age 67, right hemisphere 6.2
2529 Female, age 94, left hemisphere 4.5
2148 Female, age 91, left hemisphere 4.3
1911 Female, age 85, right hemisphere 4.1
Dentate gyrus
nTPM: 7.6
2246 Female, age 85, both hemispheres 12.6
2531 Female, age 67, both hemispheres 9.7
2010 Male, age 76, both hemispheres 6.9
1927 Female, age 91, both hemispheres 5.6
2530 Female, age 94, left hemisphere 5.5
2528 Male, age 74, both hemispheres 5.4
Entorhinal gyrus
nTPM: 14.7
2764 Male, age 80, right hemisphere 21.7
2686 Male, age 75, right hemisphere 18.2
2613 Female, age 94, left hemisphere 16.4
1787 Male, age 76, left hemisphere 13.0
1938 Female, age 85, left hemisphere 11.8
2117 Female, age 91, right hemisphere 7.0
Hippocampus, CA1
nTPM: 9.3
2082 Female, age 91, right hemisphere 12.9
2749 Male, age 80, left hemisphere 12.8
2045 Male, age 76, both hemispheres 10.6
1873 Female, age 85, both hemispheres 5.4
2527 Male, age 74, both hemispheres 4.8
Hippocampus, CA2
nTPM: 9.0
1940 Female, age 85, left hemisphere 13.9
2437 Female, age 94, left hemisphere 10.4
2113 Female, age 91, right hemisphere 10.2
1892 Male, age 76, both hemispheres 9.6
1963 Male, age 80, left hemisphere 5.8
2249 Male, age 74, both hemispheres 3.9
Hippocampus, CA3
nTPM: 7.2
2137 Male, age 80, left hemisphere 11.2
1867 Male, age 76, both hemispheres 8.5
2861 Female, age 67, both hemispheres 7.9
1891 Female, age 85, both hemispheres 5.9
2620 Female, age 94, left hemisphere 5.2
2436 Male, age 74, both hemispheres 4.7
Parahippocampal cortex
nTPM: 17.4
2532 Female, age 72, left hemisphere 24.2
1850 Male, age 80, both hemispheres 22.1
2693 Female, age 94, both hemispheres 20.8
2622 Female, age 67, right hemisphere 20.1
2245 Female, age 91, both hemispheres 19.2
1933 Female, age 85, both hemispheres 17.5
2250 Female, age 67, right hemisphere 15.8
1990 Female, age 91, right hemisphere 15.4
2018 Male, age 76, both hemispheres 10.0
2692 Male, age 74, both hemispheres 8.8
Perirhinal gyrus
nTPM: 24.8
1794 Male, age 80, right hemisphere 31.0
2521 Female, age 94, right hemisphere 28.9
1847 Female, age 91, left hemisphere 23.2
1841 Female, age 85, right hemisphere 21.4
2848 Male, age 76, right hemisphere 19.5
Subiculum
nTPM: 8.9
1977 Female, age 85, both hemispheres 15.2
2619 Male, age 74, both hemispheres 10.3
1901 Male, age 80, both hemispheres 9.0
2438 Female, age 94, left hemisphere 8.8
2042 Male, age 76, both hemispheres 5.3
2729 Female, age 91, right hemisphere 4.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.7
Samples: 197

Max nTPM: 25.7
Min nTPM: 0.0
Std nTPM: 4.5
Median nTPM: 3.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 25.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 20.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 19.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 19.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 16.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 15.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 15.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 13.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 12.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.7
FF:10169-103B7 60 years, female 1.0
FF:10153-102I9 76 years, female 0.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 41.3
Min nTPM: 21.4
Sample A Male 34.7
Sample B Male 41.3
Sample C Female 21.4
Sample D Female 33.5
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 12.1
Min nTPM: 4.1
Sample A Male 12.1
Sample B Male 5.4
Sample C Female 4.1
Sample D Female 8.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69236993 Antisense, RP_050331_01_F05, Mouse strain C57BL/6J (56 days, male) 1.8
70560342 Antisense, RP_050331_01_F05, Mouse strain C57BL/6J (56 days, male) 1.6

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