HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:29.7 nTPM
HPA Brain:32.3 nTPM
GTEx:29.7 nTPM
FANTOM5:63.5 Scaled Tags Per Million
Pig:63.2 nTPM
Mouse:39.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009142
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 30.7
1898 Male, age 80, left hemisphere 36.5
2529 Female, age 94, left hemisphere 34.2
1855 Male, age 76, left hemisphere 29.8
2621 Female, age 67, right hemisphere 28.5
1911 Female, age 85, right hemisphere 27.6
2148 Female, age 91, left hemisphere 27.5
Dentate gyrus
nTPM: 29.5
2528 Male, age 74, both hemispheres 35.3
2010 Male, age 76, both hemispheres 33.9
1927 Female, age 91, both hemispheres 28.8
2246 Female, age 85, both hemispheres 27.9
2530 Female, age 94, left hemisphere 26.4
2531 Female, age 67, both hemispheres 24.8
Entorhinal gyrus
nTPM: 30.1
1787 Male, age 76, left hemisphere 34.6
2764 Male, age 80, right hemisphere 33.1
1938 Female, age 85, left hemisphere 31.9
2613 Female, age 94, left hemisphere 29.7
2117 Female, age 91, right hemisphere 29.1
2686 Male, age 75, right hemisphere 21.9
Hippocampus, CA1
nTPM: 31.5
2749 Male, age 80, left hemisphere 40.3
1873 Female, age 85, both hemispheres 33.0
2527 Male, age 74, both hemispheres 31.9
2045 Male, age 76, both hemispheres 28.3
2082 Female, age 91, right hemisphere 24.0
Hippocampus, CA2
nTPM: 30.2
1892 Male, age 76, both hemispheres 38.8
1963 Male, age 80, left hemisphere 34.0
2249 Male, age 74, both hemispheres 30.1
2437 Female, age 94, left hemisphere 29.3
1940 Female, age 85, left hemisphere 24.6
2113 Female, age 91, right hemisphere 24.5
Hippocampus, CA3
nTPM: 28.8
2620 Female, age 94, left hemisphere 32.5
1867 Male, age 76, both hemispheres 31.5
2436 Male, age 74, both hemispheres 29.7
1891 Female, age 85, both hemispheres 28.8
2137 Male, age 80, left hemisphere 28.6
2861 Female, age 67, both hemispheres 21.8
Parahippocampal cortex
nTPM: 27.3
1850 Male, age 80, both hemispheres 33.2
1933 Female, age 85, both hemispheres 30.0
1990 Female, age 91, right hemisphere 29.2
2532 Female, age 72, left hemisphere 28.0
2018 Male, age 76, both hemispheres 27.6
2692 Male, age 74, both hemispheres 27.2
2245 Female, age 91, both hemispheres 26.5
2250 Female, age 67, right hemisphere 26.2
2622 Female, age 67, right hemisphere 23.7
2693 Female, age 94, both hemispheres 21.3
Perirhinal gyrus
nTPM: 32.3
1794 Male, age 80, right hemisphere 38.6
1847 Female, age 91, left hemisphere 38.5
1841 Female, age 85, right hemisphere 31.3
2521 Female, age 94, right hemisphere 27.3
2848 Male, age 76, right hemisphere 26.0
Subiculum
nTPM: 29.2
2619 Male, age 74, both hemispheres 32.3
1977 Female, age 85, both hemispheres 32.0
2729 Female, age 91, right hemisphere 29.1
1901 Male, age 80, both hemispheres 29.0
2438 Female, age 94, left hemisphere 27.5
2042 Male, age 76, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.7
Samples: 197

Max nTPM: 55.8
Min nTPM: 14.6
Std nTPM: 7.3
Median nTPM: 28.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 55.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 51.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 49.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 49.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 48.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 46.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 44.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 44.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.5
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.2
Pig sample Sample description nTPM
Subiculum
nTPM: 44.8
Samples: 4

Max nTPM: 57.5
Min nTPM: 35.2
Sample A Female 57.5
Sample B Female 46.7
Sample C Male 39.7
Sample D Male 35.2
Dorsal hippocampus
nTPM: 63.2
Samples: 4

Max nTPM: 95.5
Min nTPM: 33.6
Sample A Female 95.5
Sample B Female 55.1
Sample C Male 68.6
Sample D Male 33.6
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 48.4
Min nTPM: 33.3
Sample A Female 36.8
Sample B Female 48.4
Sample C Male 40.8
Sample D Male 33.3
Ventral hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 33.6
Sample A Female 51.6
Sample B Female 33.6
Sample C Male 49.4
Sample D Male 46.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.9
Samples: 4

Max nTPM: 43.4
Min nTPM: 38.4
Sample A Male 43.4
Sample B Male 38.6
Sample C Female 39.1
Sample D Female 38.4
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 43.8
Min nTPM: 33.2
Sample A Male 43.8
Sample B Male 33.2
Sample C Female 37.4
Sample D Female 38.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69568926 Antisense, RP_050426_03_B03, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org