HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:441.9 nTPM
HPA Brain:441.9 nTPM
GTEx:441.9 nTPM
FANTOM5:621.6 Scaled Tags Per Million
Pig:391.3 nTPM
Mouse:436.7 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007234Antibody CAB002507
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 441.9
Sample id Sample description nTPM
Hippocampus
nTPM: 441.9
1898 Male, age 80, left hemisphere 505.2
2529 Female, age 94, left hemisphere 470.1
1855 Male, age 76, left hemisphere 458.4
2148 Female, age 91, left hemisphere 457.6
1911 Female, age 85, right hemisphere 405.0
2621 Female, age 67, right hemisphere 354.8
Dentate gyrus
nTPM: 402.0
2528 Male, age 74, both hemispheres 536.8
2530 Female, age 94, left hemisphere 487.2
2010 Male, age 76, both hemispheres 394.2
2246 Female, age 85, both hemispheres 371.3
1927 Female, age 91, both hemispheres 328.5
2531 Female, age 67, both hemispheres 293.9
Entorhinal gyrus
nTPM: 404.8
2117 Female, age 91, right hemisphere 624.2
1787 Male, age 76, left hemisphere 400.0
2764 Male, age 80, right hemisphere 375.5
1938 Female, age 85, left hemisphere 374.7
2613 Female, age 94, left hemisphere 355.8
2686 Male, age 75, right hemisphere 298.6
Hippocampus, CA1
nTPM: 378.2
2082 Female, age 91, right hemisphere 450.9
2527 Male, age 74, both hemispheres 411.2
1873 Female, age 85, both hemispheres 400.4
2749 Male, age 80, left hemisphere 329.7
2045 Male, age 76, both hemispheres 298.9
Hippocampus, CA2
nTPM: 427.2
2249 Male, age 74, both hemispheres 507.3
2113 Female, age 91, right hemisphere 456.6
1940 Female, age 85, left hemisphere 447.6
1963 Male, age 80, left hemisphere 445.1
2437 Female, age 94, left hemisphere 409.0
1892 Male, age 76, both hemispheres 297.3
Hippocampus, CA3
nTPM: 359.6
2436 Male, age 74, both hemispheres 404.0
1891 Female, age 85, both hemispheres 389.1
2620 Female, age 94, left hemisphere 377.0
2861 Female, age 67, both hemispheres 355.2
1867 Male, age 76, both hemispheres 335.7
2137 Male, age 80, left hemisphere 296.3
Parahippocampal cortex
nTPM: 342.6
2250 Female, age 67, right hemisphere 403.2
1933 Female, age 85, both hemispheres 383.3
2018 Male, age 76, both hemispheres 374.3
1990 Female, age 91, right hemisphere 374.2
1850 Male, age 80, both hemispheres 332.0
2692 Male, age 74, both hemispheres 331.7
2245 Female, age 91, both hemispheres 326.9
2622 Female, age 67, right hemisphere 325.2
2693 Female, age 94, both hemispheres 288.4
2532 Female, age 72, left hemisphere 287.2
Perirhinal gyrus
nTPM: 324.7
1794 Male, age 80, right hemisphere 376.6
1847 Female, age 91, left hemisphere 344.5
1841 Female, age 85, right hemisphere 315.3
2521 Female, age 94, right hemisphere 309.8
2848 Male, age 76, right hemisphere 277.0
Subiculum
nTPM: 409.3
2729 Female, age 91, right hemisphere 583.1
2042 Male, age 76, both hemispheres 428.2
2619 Male, age 74, both hemispheres 410.4
1977 Female, age 85, both hemispheres 384.7
1901 Male, age 80, both hemispheres 382.9
2438 Female, age 94, left hemisphere 266.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 441.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 441.9
Samples: 197

Max nTPM: 884.3
Min nTPM: 254.3
Std nTPM: 108.1
Median nTPM: 432.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 884.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 778.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 740.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 721.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 680.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 677.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 663.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 646.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 640.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 634.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 631.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 621.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 621.6
FF:10169-103B7 60 years, female 674.0
FF:10153-102I9 76 years, female 569.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 391.3
Pig sample Sample description nTPM
Subiculum
nTPM: 371.2
Samples: 4

Max nTPM: 487.9
Min nTPM: 324.1
Sample A Female 487.9
Sample B Female 328.6
Sample C Male 344.0
Sample D Male 324.1
Dorsal hippocampus
nTPM: 363.7
Samples: 4

Max nTPM: 459.1
Min nTPM: 285.2
Sample A Female 459.1
Sample B Female 290.9
Sample C Male 419.5
Sample D Male 285.2
Entorhinal cortex
nTPM: 331.7
Samples: 4

Max nTPM: 389.5
Min nTPM: 258.5
Sample A Female 389.5
Sample B Female 317.3
Sample C Male 361.3
Sample D Male 258.5
Ventral hippocampus
nTPM: 391.3
Samples: 4

Max nTPM: 523.7
Min nTPM: 279.0
Sample A Female 409.2
Sample B Female 279.0
Sample C Male 523.7
Sample D Male 353.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 436.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 374.1
Samples: 4

Max nTPM: 405.2
Min nTPM: 333.7
Sample A Male 375.0
Sample B Male 333.7
Sample C Female 405.2
Sample D Female 382.3
Hippocampal formation
nTPM: 436.8
Samples: 4

Max nTPM: 483.7
Min nTPM: 381.0
Sample A Male 412.9
Sample B Male 381.0
Sample C Female 483.7
Sample D Female 469.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68269526 Antisense, RP_041129_01_G04, Mouse strain C57BL/6J (56 days, male) 12.3
227 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 9.8
226 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 7.9

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