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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
621.7
nTPM
FANTOM5:
783.2
Scaled Tags Per Million
Pig:
593.6
nTPM
Allen mouse:
10.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
621.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 488.8
2090
Male, age 80, both hemispheres
594.9
1984
Male, age 76, both hemispheres
489.7
2301
Female, age 85, both hemispheres
459.0
2188
Female, age 91, both hemispheres
411.5
Dorsal cochlear nucleus nTPM: 595.0
2370
Male, age 61, both hemispheres
705.9
2058
Male, age 76, both hemispheres
625.6
2802
Male, age 74, right hemisphere
598.1
2378
Male, age 80, both hemispheres
582.2
2187
Female, age 91, both hemispheres
463.5
Dorsal tegmental nucleus nTPM: 567.7
2083
Male, age 80, both hemispheres
607.8
1936
Male, age 76, left hemisphere
575.2
2326
Male, age 74, both hemispheres
569.1
2358
Male, age 61, both hemispheres
518.6
Dorsolateral tegmental area nTPM: 621.7
2337
Male, age 61, both hemispheres
719.1
2360
Male, age 74, both hemispheres
675.7
2751
Female, age 85, both hemispheres
593.9
2654
Male, age 80, both hemispheres
587.4
2141
Male, age 76, both hemispheres
532.5
Kolliker-Fuse nucleus nTPM: 578.9
2315
Male, age 76, right hemisphere
870.6
2163
Male, age 80, both hemispheres
509.1
2793
Female, age 91, left hemisphere
357.0
Lateral lemniscal nuclei nTPM: 436.0
2746
Female, age 85, left hemisphere
540.5
2036
Male, age 80, both hemispheres
451.6
2169
Male, age 76, both hemispheres
428.3
2453
Male, age 74, right hemisphere
408.1
2320
Female, age 91, left hemisphere
351.5
Lateral parabrachial nucleus nTPM: 588.0
2792
Male, age 76, both hemispheres
658.5
2139
Female, age 85, right hemisphere
652.0
2013
Male, age 80, both hemispheres
570.0
2790
Male, age 61, both hemispheres
471.6
Lateral vestibular nucleus nTPM: 537.2
2311
Male, age 80, both hemispheres
587.9
2184
Male, age 76, both hemispheres
486.4
Locus coeruleus nTPM: 538.9
2317
Female, age 72, unknown
646.3
1980
Male, age 76, both hemispheres
618.4
2123
Female, age 91, both hemispheres
611.3
2014
Male, age 55, unknown
589.0
2162
Male, age 80, both hemispheres
466.0
2788
Male, age 74, unknown
460.1
2720
Male, age 74, both hemispheres
381.4
Medial parabrachial nucleus nTPM: 508.9
2463
Female, age 85, right hemisphere
569.2
2156
Male, age 61, both hemispheres
559.8
2786
Male, age 76, both hemispheres
523.1
2170
Female, age 91, both hemispheres
486.9
2854
Male, age 80, both hemispheres
405.4
Medial periolivary nuclei nTPM: 469.4
2791
Male, age 74, right hemisphere
558.7
2081
Male, age 80, both hemispheres
528.3
2063
Male, age 76, both hemispheres
520.6
2171
Female, age 85, both hemispheres
383.4
2458
Female, age 91, both hemispheres
355.9
Motor facial nucleus nTPM: 450.8
2062
Male, age 76, both hemispheres
557.8
2126
Male, age 61, both hemispheres
550.8
2365
Male, age 74, right hemisphere
504.7
2795
Female, age 91, both hemispheres
499.9
2327
Male, age 80, both hemispheres
298.6
2697
Female, age 85, both hemispheres
293.0
Motor trigeminal nucleus nTPM: 474.5
2335
Male, age 61, both hemispheres
582.4
2309
Male, age 76, both hemispheres
496.2
2560
Male, age 74, both hemispheres
462.1
2079
Male, age 80, both hemispheres
455.4
2321
Female, age 91, both hemispheres
376.6
Nuclei of the trapezoid body nTPM: 435.3
1983
Male, age 76, both hemispheres
562.2
2368
Female, age 91, both hemispheres
439.3
2735
Female, age 85, both hemispheres
430.7
2166
Male, age 80, both hemispheres
405.6
2159
Male, age 61, both hemispheres
338.4
Nucleus raphe magnus nTPM: 405.0
2051
Male, age 76, both hemispheres
530.2
2455
Male, age 74, both hemispheres
497.7
2328
Male, age 80, both hemispheres
376.8
2459
Female, age 91, both hemispheres
375.2
2160
Male, age 61, both hemispheres
351.1
2172
Female, age 85, both hemispheres
299.1
Paramedian reticular nucleus nTPM: 509.4
2057
Male, age 80, both hemispheres
631.1
2313
Male, age 61, both hemispheres
587.4
2052
Male, age 76, both hemispheres
418.6
2050
Female, age 85, both hemispheres
400.4
Pedunculopontine tegmental nucleus nTPM: 505.3
1921
Female, age 85, both hemispheres
520.1
2334
Male, age 80, both hemispheres
518.8
2338
Male, age 61, both hemispheres
477.0
Pontine nuclei nTPM: 442.1
2115
Male, age 80, left hemisphere
549.2
1968
Male, age 76, left hemisphere
540.8
2109
Female, age 72, unknown
464.1
1863
Male, age 55, unknown
462.2
2787
Female, age 85, both hemispheres
413.2
2319
Female, age 91, both hemispheres
404.4
2727
Male, age 61, right hemisphere
354.8
2454
Male, age 74, left hemisphere
347.6
Pontine raphe nucleus nTPM: 468.6
2853
Male, age 76, midline
488.0
2122
Female, age 85, midline
449.2
Posteroventral cochlear nucleus nTPM: 570.3
2371
Male, age 61, both hemispheres
757.2
2341
Male, age 80, both hemispheres
548.7
2070
Male, age 76, both hemispheres
532.3
2752
Female, age 85, both hemispheres
530.8
2135
Female, age 91, both hemispheres
482.8
Principal sensory trigeminal nucleus nTPM: 414.1
2324
Male, age 76, both hemispheres
542.5
2008
Male, age 80, left hemisphere
398.1
2158
Male, age 61, both hemispheres
377.1
2367
Female, age 91, left hemisphere
338.6
Reticular pontine nucleus, caudal nTPM: 427.4
2092
Male, age 76, both hemispheres
580.7
2559
Male, age 74, both hemispheres
417.6
2457
Female, age 91, both hemispheres
370.5
2332
Male, age 80, right hemisphere
340.8
Reticular pontine nucleus, oral nTPM: 441.7
1939
Male, age 80, both hemispheres
554.6
2012
Female, age 85, both hemispheres
473.6
2167
Male, age 76, both hemispheres
467.2
2361
Male, age 74, both hemispheres
377.5
2366
Female, age 91, both hemispheres
335.5
Reticulotegmental nucleus nTPM: 477.2
2333
Male, age 80, both hemispheres
535.0
2452
Male, age 74, both hemispheres
498.8
2322
Female, age 91, both hemispheres
438.7
2325
Male, age 76, both hemispheres
436.3
Spinal trigeminal nucleus, oral nTPM: 480.4
1978
Male, age 76, both hemispheres
522.2
2737
Female, age 85, both hemispheres
488.5
2164
Male, age 80, both hemispheres
430.5
Subcoeruleus area nTPM: 503.0
2451
Male, age 74, both hemispheres
585.1
2369
Female, age 85, left hemisphere
573.1
2089
Male, age 76, left hemisphere
483.8
1958
Male, age 80, both hemispheres
447.8
2323
Female, age 91, left hemisphere
425.1
Superior olive nTPM: 433.7
2364
Male, age 74, right hemisphere
568.8
2020
Male, age 76, both hemispheres
525.9
2561
Female, age 91, both hemispheres
379.7
2329
Male, age 80, right hemisphere
362.3
1875
Female, age 85, both hemispheres
331.9
Ventral periolivary nuclei nTPM: 418.3
2023
Male, age 76, both hemispheres
543.5
2165
Male, age 80, both hemispheres
419.7
2130
Female, age 85, both hemispheres
389.3
2794
Female, age 91, left hemisphere
320.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 465.2
2359
Male, age 61, both hemispheres
535.6
1959
Male, age 76, both hemispheres
489.4
2456
Female, age 91, both hemispheres
463.9
2161
Male, age 80, both hemispheres
461.8
2449
Male, age 74, both hemispheres
449.0
2840
Female, age 85, both hemispheres
391.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
593.6
Pig sample
Sample description
nTPM
Pons nTPM: 593.6
Samples: 4
Max nTPM: 665.1
Min nTPM: 459.9
Sample A
Female
603.6
Sample B
Female
459.9
Sample C
Male
645.7
Sample D
Male
665.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
