HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.0 nTPM
HPA Brain:75.3 nTPM
GTEx:27.0 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:49.4 nTPM
Mouse:58.6 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060227
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.3
Sample id Sample description nTPM
Hippocampus
nTPM: 65.0
2621 Female, age 67, right hemisphere 91.0
2529 Female, age 94, left hemisphere 81.5
1898 Male, age 80, left hemisphere 58.5
2148 Female, age 91, left hemisphere 57.2
1911 Female, age 85, right hemisphere 55.4
1855 Male, age 76, left hemisphere 46.1
Dentate gyrus
nTPM: 57.5
1927 Female, age 91, both hemispheres 72.4
2530 Female, age 94, left hemisphere 69.3
2531 Female, age 67, both hemispheres 61.0
2246 Female, age 85, both hemispheres 53.0
2528 Male, age 74, both hemispheres 45.3
2010 Male, age 76, both hemispheres 43.9
Entorhinal gyrus
nTPM: 75.3
2613 Female, age 94, left hemisphere 113.9
2686 Male, age 75, right hemisphere 84.6
1938 Female, age 85, left hemisphere 73.1
2764 Male, age 80, right hemisphere 66.4
1787 Male, age 76, left hemisphere 63.2
2117 Female, age 91, right hemisphere 50.5
Hippocampus, CA1
nTPM: 51.5
2082 Female, age 91, right hemisphere 61.9
2749 Male, age 80, left hemisphere 57.4
2527 Male, age 74, both hemispheres 56.0
1873 Female, age 85, both hemispheres 54.5
2045 Male, age 76, both hemispheres 28.0
Hippocampus, CA2
nTPM: 65.7
1963 Male, age 80, left hemisphere 91.7
2437 Female, age 94, left hemisphere 82.6
2113 Female, age 91, right hemisphere 61.1
1892 Male, age 76, both hemispheres 58.3
1940 Female, age 85, left hemisphere 54.1
2249 Male, age 74, both hemispheres 46.1
Hippocampus, CA3
nTPM: 58.5
2861 Female, age 67, both hemispheres 91.0
2436 Male, age 74, both hemispheres 67.9
2137 Male, age 80, left hemisphere 57.3
1891 Female, age 85, both hemispheres 47.6
2620 Female, age 94, left hemisphere 43.8
1867 Male, age 76, both hemispheres 43.6
Parahippocampal cortex
nTPM: 69.4
2622 Female, age 67, right hemisphere 94.8
2245 Female, age 91, both hemispheres 85.5
2693 Female, age 94, both hemispheres 75.6
2250 Female, age 67, right hemisphere 74.7
1933 Female, age 85, both hemispheres 67.3
1990 Female, age 91, right hemisphere 66.8
2692 Male, age 74, both hemispheres 64.1
1850 Male, age 80, both hemispheres 60.3
2532 Female, age 72, left hemisphere 59.3
2018 Male, age 76, both hemispheres 46.0
Perirhinal gyrus
nTPM: 68.8
1847 Female, age 91, left hemisphere 92.6
2521 Female, age 94, right hemisphere 70.8
1794 Male, age 80, right hemisphere 64.1
1841 Female, age 85, right hemisphere 62.3
2848 Male, age 76, right hemisphere 54.2
Subiculum
nTPM: 53.4
2619 Male, age 74, both hemispheres 68.9
2438 Female, age 94, left hemisphere 64.2
1977 Female, age 85, both hemispheres 58.6
1901 Male, age 80, both hemispheres 45.9
2729 Female, age 91, right hemisphere 44.9
2042 Male, age 76, both hemispheres 38.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.0
Samples: 197

Max nTPM: 83.7
Min nTPM: 2.8
Std nTPM: 15.1
Median nTPM: 23.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 83.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 80.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 73.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 70.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 62.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 61.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 57.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 56.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 56.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 55.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10153-102I9 76 years, female 28.5
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.4
Pig sample Sample description nTPM
Subiculum
nTPM: 42.6
Samples: 4

Max nTPM: 55.8
Min nTPM: 33.9
Sample A Female 55.8
Sample B Female 37.7
Sample C Male 42.8
Sample D Male 33.9
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 32.3
Min nTPM: 18.4
Sample A Female 32.3
Sample B Female 26.7
Sample C Male 30.6
Sample D Male 18.4
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 56.3
Min nTPM: 42.5
Sample A Female 50.4
Sample B Female 48.2
Sample C Male 56.3
Sample D Male 42.5
Ventral hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 50.0
Min nTPM: 27.9
Sample A Female 33.0
Sample B Female 27.9
Sample C Male 50.0
Sample D Male 28.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.6
Samples: 4

Max nTPM: 60.2
Min nTPM: 54.0
Sample A Male 60.0
Sample B Male 60.2
Sample C Female 54.0
Sample D Female 60.2
Hippocampal formation
nTPM: 47.2
Samples: 4

Max nTPM: 52.9
Min nTPM: 42.3
Sample A Male 44.8
Sample B Male 48.7
Sample C Female 42.3
Sample D Female 52.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
68845371 Antisense, RP_050224_01_F08, Mouse strain C57BL/6J (56 days, male) 7.9

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