HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:133.1 nTPM
HPA Brain:98.8 nTPM
GTEx:133.1 nTPM
FANTOM5:117.3 Scaled Tags Per Million
Pig:102.8 nTPM
Mouse:182.3 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018524Antibody HPA067429
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 98.8
Sample id Sample description nTPM
Hippocampus
nTPM: 86.7
1898 Male, age 80, left hemisphere 109.8
2621 Female, age 67, right hemisphere 87.4
2529 Female, age 94, left hemisphere 86.3
1855 Male, age 76, left hemisphere 86.2
2148 Female, age 91, left hemisphere 76.4
1911 Female, age 85, right hemisphere 74.0
Dentate gyrus
nTPM: 90.2
2530 Female, age 94, left hemisphere 111.4
1927 Female, age 91, both hemispheres 97.5
2010 Male, age 76, both hemispheres 93.4
2528 Male, age 74, both hemispheres 86.1
2246 Female, age 85, both hemispheres 85.6
2531 Female, age 67, both hemispheres 67.4
Entorhinal gyrus
nTPM: 85.0
2764 Male, age 80, right hemisphere 96.7
1938 Female, age 85, left hemisphere 92.6
2613 Female, age 94, left hemisphere 86.4
1787 Male, age 76, left hemisphere 86.3
2117 Female, age 91, right hemisphere 81.4
2686 Male, age 75, right hemisphere 66.8
Hippocampus, CA1
nTPM: 98.8
2749 Male, age 80, left hemisphere 139.4
2527 Male, age 74, both hemispheres 102.7
2082 Female, age 91, right hemisphere 88.2
1873 Female, age 85, both hemispheres 84.5
2045 Male, age 76, both hemispheres 79.5
Hippocampus, CA2
nTPM: 92.6
1963 Male, age 80, left hemisphere 105.6
2249 Male, age 74, both hemispheres 101.6
2437 Female, age 94, left hemisphere 99.4
1892 Male, age 76, both hemispheres 97.9
1940 Female, age 85, left hemisphere 78.1
2113 Female, age 91, right hemisphere 72.9
Hippocampus, CA3
nTPM: 98.5
2436 Male, age 74, both hemispheres 143.3
2137 Male, age 80, left hemisphere 114.6
2620 Female, age 94, left hemisphere 90.2
1867 Male, age 76, both hemispheres 90.0
1891 Female, age 85, both hemispheres 77.7
2861 Female, age 67, both hemispheres 75.0
Parahippocampal cortex
nTPM: 81.2
2250 Female, age 67, right hemisphere 95.3
1990 Female, age 91, right hemisphere 91.6
2245 Female, age 91, both hemispheres 91.4
1933 Female, age 85, both hemispheres 85.7
2532 Female, age 72, left hemisphere 84.9
1850 Male, age 80, both hemispheres 84.8
2018 Male, age 76, both hemispheres 73.3
2622 Female, age 67, right hemisphere 70.0
2693 Female, age 94, both hemispheres 68.5
2692 Male, age 74, both hemispheres 66.3
Perirhinal gyrus
nTPM: 93.6
1847 Female, age 91, left hemisphere 113.5
1794 Male, age 80, right hemisphere 104.5
2521 Female, age 94, right hemisphere 95.4
1841 Female, age 85, right hemisphere 84.0
2848 Male, age 76, right hemisphere 70.7
Subiculum
nTPM: 85.9
1901 Male, age 80, both hemispheres 93.6
1977 Female, age 85, both hemispheres 93.1
2438 Female, age 94, left hemisphere 89.8
2619 Male, age 74, both hemispheres 89.1
2042 Male, age 76, both hemispheres 75.9
2729 Female, age 91, right hemisphere 73.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 133.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 133.1
Samples: 197

Max nTPM: 279.1
Min nTPM: 53.9
Std nTPM: 39.5
Median nTPM: 127.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 279.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 279.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 274.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 261.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 256.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 233.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 231.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 230.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 228.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 222.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 220.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.3
FF:10169-103B7 60 years, female 131.8
FF:10153-102I9 76 years, female 102.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 102.8
Pig sample Sample description nTPM
Subiculum
nTPM: 81.9
Samples: 4

Max nTPM: 110.7
Min nTPM: 67.4
Sample A Female 110.7
Sample B Female 74.7
Sample C Male 74.6
Sample D Male 67.4
Dorsal hippocampus
nTPM: 102.8
Samples: 4

Max nTPM: 142.2
Min nTPM: 78.5
Sample A Female 142.2
Sample B Female 89.2
Sample C Male 101.4
Sample D Male 78.5
Entorhinal cortex
nTPM: 88.4
Samples: 4

Max nTPM: 105.8
Min nTPM: 74.1
Sample A Female 85.3
Sample B Female 105.8
Sample C Male 88.4
Sample D Male 74.1
Ventral hippocampus
nTPM: 98.0
Samples: 4

Max nTPM: 117.1
Min nTPM: 69.3
Sample A Female 109.2
Sample B Female 69.3
Sample C Male 117.1
Sample D Male 96.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 182.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 173.6
Samples: 4

Max nTPM: 189.7
Min nTPM: 160.0
Sample A Male 160.0
Sample B Male 179.6
Sample C Female 189.7
Sample D Female 165.0
Hippocampal formation
nTPM: 182.3
Samples: 4

Max nTPM: 194.6
Min nTPM: 166.2
Sample A Male 194.1
Sample B Male 166.2
Sample C Female 174.1
Sample D Female 194.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
74819243 Antisense, RP_060315_02_C07, Mouse strain C57BL/6J (56 days, male) 8.2
68910967 Antisense, RP_050118_01_A01, Mouse strain C57BL/6J (56 days, male) 7.9

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