HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:126.6 nTPM
HPA Brain:55.6 nTPM
GTEx:126.6 nTPM
FANTOM5:63.4 Scaled Tags Per Million
Pig:28.1 nTPM
Mouse:14.9 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039923
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.6
Sample id Sample description nTPM
Hippocampus
nTPM: 55.6
1898 Male, age 80, left hemisphere 68.1
2621 Female, age 67, right hemisphere 58.8
2529 Female, age 94, left hemisphere 57.3
1855 Male, age 76, left hemisphere 56.8
1911 Female, age 85, right hemisphere 50.7
2148 Female, age 91, left hemisphere 42.0
Dentate gyrus
nTPM: 48.6
2010 Male, age 76, both hemispheres 57.5
2530 Female, age 94, left hemisphere 55.7
1927 Female, age 91, both hemispheres 50.8
2528 Male, age 74, both hemispheres 48.0
2246 Female, age 85, both hemispheres 44.4
2531 Female, age 67, both hemispheres 35.2
Entorhinal gyrus
nTPM: 46.0
1938 Female, age 85, left hemisphere 53.5
2117 Female, age 91, right hemisphere 47.9
1787 Male, age 76, left hemisphere 46.8
2764 Male, age 80, right hemisphere 45.6
2686 Male, age 75, right hemisphere 43.3
2613 Female, age 94, left hemisphere 38.7
Hippocampus, CA1
nTPM: 50.8
2749 Male, age 80, left hemisphere 60.1
1873 Female, age 85, both hemispheres 54.7
2527 Male, age 74, both hemispheres 48.4
2045 Male, age 76, both hemispheres 47.3
2082 Female, age 91, right hemisphere 43.4
Hippocampus, CA2
nTPM: 54.1
1963 Male, age 80, left hemisphere 63.0
1892 Male, age 76, both hemispheres 62.7
2249 Male, age 74, both hemispheres 57.6
1940 Female, age 85, left hemisphere 49.5
2437 Female, age 94, left hemisphere 46.9
2113 Female, age 91, right hemisphere 44.7
Hippocampus, CA3
nTPM: 48.7
1867 Male, age 76, both hemispheres 58.8
1891 Female, age 85, both hemispheres 54.4
2137 Male, age 80, left hemisphere 52.9
2436 Male, age 74, both hemispheres 47.6
2620 Female, age 94, left hemisphere 39.4
2861 Female, age 67, both hemispheres 39.2
Parahippocampal cortex
nTPM: 47.1
1850 Male, age 80, both hemispheres 60.2
2018 Male, age 76, both hemispheres 54.0
1933 Female, age 85, both hemispheres 52.3
2250 Female, age 67, right hemisphere 47.9
1990 Female, age 91, right hemisphere 46.2
2532 Female, age 72, left hemisphere 46.0
2245 Female, age 91, both hemispheres 44.9
2692 Male, age 74, both hemispheres 44.6
2622 Female, age 67, right hemisphere 38.2
2693 Female, age 94, both hemispheres 36.1
Perirhinal gyrus
nTPM: 51.7
1847 Female, age 91, left hemisphere 60.5
1841 Female, age 85, right hemisphere 59.8
1794 Male, age 80, right hemisphere 54.5
2521 Female, age 94, right hemisphere 43.7
2848 Male, age 76, right hemisphere 40.2
Subiculum
nTPM: 50.5
2042 Male, age 76, both hemispheres 60.5
1901 Male, age 80, both hemispheres 58.6
1977 Female, age 85, both hemispheres 52.3
2438 Female, age 94, left hemisphere 45.6
2619 Male, age 74, both hemispheres 45.3
2729 Female, age 91, right hemisphere 41.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 126.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.6
Samples: 197

Max nTPM: 350.6
Min nTPM: 71.9
Std nTPM: 32.8
Median nTPM: 119.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 350.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 228.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 228.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 227.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 205.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 199.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 197.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 196.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 194.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 187.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 186.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.4
FF:10153-102I9 76 years, female 65.7
FF:10169-103B7 60 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.1
Pig sample Sample description nTPM
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 35.0
Min nTPM: 19.1
Sample A Female 35.0
Sample B Female 21.2
Sample C Male 19.1
Sample D Male 23.3
Dorsal hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 34.8
Min nTPM: 22.1
Sample A Female 34.8
Sample B Female 24.5
Sample C Male 31.2
Sample D Male 22.1
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 31.5
Min nTPM: 20.9
Sample A Female 27.8
Sample B Female 31.5
Sample C Male 24.4
Sample D Male 20.9
Ventral hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 28.4
Min nTPM: 18.4
Sample A Female 26.3
Sample B Female 18.4
Sample C Male 25.7
Sample D Male 28.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 15.4
Min nTPM: 13.8
Sample A Male 13.8
Sample B Male 14.3
Sample C Female 15.3
Sample D Female 15.4
Hippocampal formation
nTPM: 14.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.9
Sample A Male 13.9
Sample B Male 14.2
Sample C Female 15.9
Sample D Female 15.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
68410452 Antisense, RP_041214_01_H10, Mouse strain C57BL/6J (56 days, male) 4.2

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