HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:56.8 nTPM
HPA Brain:15.8 nTPM
GTEx:56.8 nTPM
FANTOM5:89.7 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:97.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
1898 Male, age 80, left hemisphere 19.8
2529 Female, age 94, left hemisphere 16.4
2621 Female, age 67, right hemisphere 14.9
2148 Female, age 91, left hemisphere 14.6
1911 Female, age 85, right hemisphere 14.3
1855 Male, age 76, left hemisphere 13.8
Dentate gyrus
nTPM: 13.3
2528 Male, age 74, both hemispheres 15.3
2010 Male, age 76, both hemispheres 15.2
2530 Female, age 94, left hemisphere 15.2
1927 Female, age 91, both hemispheres 12.4
2246 Female, age 85, both hemispheres 12.2
2531 Female, age 67, both hemispheres 9.7
Entorhinal gyrus
nTPM: 13.9
2117 Female, age 91, right hemisphere 20.2
1787 Male, age 76, left hemisphere 13.9
2764 Male, age 80, right hemisphere 13.8
1938 Female, age 85, left hemisphere 13.4
2686 Male, age 75, right hemisphere 11.7
2613 Female, age 94, left hemisphere 10.3
Hippocampus, CA1
nTPM: 14.2
2527 Male, age 74, both hemispheres 17.8
2082 Female, age 91, right hemisphere 14.9
1873 Female, age 85, both hemispheres 13.3
2749 Male, age 80, left hemisphere 12.6
2045 Male, age 76, both hemispheres 12.4
Hippocampus, CA2
nTPM: 15.8
2249 Male, age 74, both hemispheres 24.0
1940 Female, age 85, left hemisphere 17.8
2113 Female, age 91, right hemisphere 14.3
2437 Female, age 94, left hemisphere 13.1
1892 Male, age 76, both hemispheres 12.9
1963 Male, age 80, left hemisphere 12.7
Hippocampus, CA3
nTPM: 13.8
2436 Male, age 74, both hemispheres 22.4
1891 Female, age 85, both hemispheres 15.0
1867 Male, age 76, both hemispheres 13.7
2620 Female, age 94, left hemisphere 10.9
2861 Female, age 67, both hemispheres 10.3
2137 Male, age 80, left hemisphere 10.1
Parahippocampal cortex
nTPM: 14.3
2018 Male, age 76, both hemispheres 17.1
1850 Male, age 80, both hemispheres 16.7
2250 Female, age 67, right hemisphere 16.3
1990 Female, age 91, right hemisphere 15.3
1933 Female, age 85, both hemispheres 14.5
2693 Female, age 94, both hemispheres 13.6
2532 Female, age 72, left hemisphere 13.2
2692 Male, age 74, both hemispheres 13.0
2245 Female, age 91, both hemispheres 12.2
2622 Female, age 67, right hemisphere 10.8
Perirhinal gyrus
nTPM: 15.2
1841 Female, age 85, right hemisphere 16.6
1794 Male, age 80, right hemisphere 15.9
1847 Female, age 91, left hemisphere 15.2
2521 Female, age 94, right hemisphere 14.8
2848 Male, age 76, right hemisphere 13.4
Subiculum
nTPM: 14.2
2729 Female, age 91, right hemisphere 17.3
2042 Male, age 76, both hemispheres 15.9
2619 Male, age 74, both hemispheres 15.3
1977 Female, age 85, both hemispheres 14.2
1901 Male, age 80, both hemispheres 13.7
2438 Female, age 94, left hemisphere 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.8
Samples: 197

Max nTPM: 138.0
Min nTPM: 25.6
Std nTPM: 13.8
Median nTPM: 55.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 138.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 89.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 88.5
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 87.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 87.2
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 84.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 84.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 81.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 81.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 80.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 78.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.7
FF:10153-102I9 76 years, female 102.7
FF:10169-103B7 60 years, female 76.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 21.7
Min nTPM: 19.8
Sample A Female 19.8
Sample B Female 21.7
Sample C Male 21.6
Sample D Male 21.5
Dorsal hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 24.1
Min nTPM: 21.2
Sample A Female 24.1
Sample B Female 23.3
Sample C Male 21.2
Sample D Male 22.5
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 20.1
Min nTPM: 18.5
Sample A Female 18.9
Sample B Female 20.1
Sample C Male 18.5
Sample D Male 19.4
Ventral hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 23.7
Min nTPM: 20.6
Sample A Female 23.5
Sample B Female 20.6
Sample C Male 23.7
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.8
Samples: 4

Max nTPM: 95.4
Min nTPM: 88.3
Sample A Male 88.3
Sample B Male 95.4
Sample C Female 94.7
Sample D Female 88.8
Hippocampal formation
nTPM: 97.7
Samples: 4

Max nTPM: 104.3
Min nTPM: 87.3
Sample A Male 104.3
Sample B Male 87.3
Sample C Female 100.2
Sample D Female 99.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68151363 Antisense, RP_041116_01_A08, Mouse strain C57BL/6J (56 days, male) 0.7

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