HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:137.5 nTPM
HPA Brain:44.7 nTPM
GTEx:137.5 nTPM
FANTOM5:35.5 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:33.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035677
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.7
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
1898 Male, age 80, left hemisphere 53.9
1855 Male, age 76, left hemisphere 44.8
2621 Female, age 67, right hemisphere 43.6
2529 Female, age 94, left hemisphere 40.6
2148 Female, age 91, left hemisphere 36.6
1911 Female, age 85, right hemisphere 34.4
Dentate gyrus
nTPM: 41.7
2530 Female, age 94, left hemisphere 62.1
2010 Male, age 76, both hemispheres 50.3
1927 Female, age 91, both hemispheres 41.9
2246 Female, age 85, both hemispheres 34.9
2528 Male, age 74, both hemispheres 33.6
2531 Female, age 67, both hemispheres 27.5
Entorhinal gyrus
nTPM: 31.6
1938 Female, age 85, left hemisphere 38.0
1787 Male, age 76, left hemisphere 36.3
2117 Female, age 91, right hemisphere 30.3
2686 Male, age 75, right hemisphere 29.8
2613 Female, age 94, left hemisphere 28.4
2764 Male, age 80, right hemisphere 27.1
Hippocampus, CA1
nTPM: 40.1
1873 Female, age 85, both hemispheres 51.1
2749 Male, age 80, left hemisphere 43.4
2045 Male, age 76, both hemispheres 37.6
2527 Male, age 74, both hemispheres 34.7
2082 Female, age 91, right hemisphere 33.5
Hippocampus, CA2
nTPM: 44.7
1963 Male, age 80, left hemisphere 74.1
1892 Male, age 76, both hemispheres 46.3
2249 Male, age 74, both hemispheres 45.2
2437 Female, age 94, left hemisphere 42.9
1940 Female, age 85, left hemisphere 29.9
2113 Female, age 91, right hemisphere 29.5
Hippocampus, CA3
nTPM: 35.5
2436 Male, age 74, both hemispheres 51.2
1867 Male, age 76, both hemispheres 40.1
1891 Female, age 85, both hemispheres 35.5
2861 Female, age 67, both hemispheres 30.3
2137 Male, age 80, left hemisphere 29.5
2620 Female, age 94, left hemisphere 26.4
Parahippocampal cortex
nTPM: 33.5
1850 Male, age 80, both hemispheres 41.1
2692 Male, age 74, both hemispheres 38.0
1990 Female, age 91, right hemisphere 36.5
2245 Female, age 91, both hemispheres 36.2
2250 Female, age 67, right hemisphere 36.1
2018 Male, age 76, both hemispheres 35.2
1933 Female, age 85, both hemispheres 31.3
2532 Female, age 72, left hemisphere 31.3
2622 Female, age 67, right hemisphere 26.6
2693 Female, age 94, both hemispheres 22.4
Perirhinal gyrus
nTPM: 35.4
1847 Female, age 91, left hemisphere 46.0
1794 Male, age 80, right hemisphere 38.0
1841 Female, age 85, right hemisphere 35.0
2521 Female, age 94, right hemisphere 31.2
2848 Male, age 76, right hemisphere 26.6
Subiculum
nTPM: 32.5
2619 Male, age 74, both hemispheres 37.6
1977 Female, age 85, both hemispheres 34.9
2729 Female, age 91, right hemisphere 33.0
2042 Male, age 76, both hemispheres 32.1
1901 Male, age 80, both hemispheres 30.3
2438 Female, age 94, left hemisphere 26.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 137.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 137.5
Samples: 197

Max nTPM: 377.9
Min nTPM: 46.3
Std nTPM: 42.4
Median nTPM: 133.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 377.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 267.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 248.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 236.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 227.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 227.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 226.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 225.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 225.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 223.5
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 223.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.5
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 30.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Subiculum
nTPM: 6.5
Samples: 4

Max nTPM: 6.8
Min nTPM: 6.2
Sample A Female 6.2
Sample B Female 6.6
Sample C Male 6.3
Sample D Male 6.8
Dorsal hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.3
Sample A Female 7.3
Sample B Female 7.6
Sample C Male 6.3
Sample D Male 8.4
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 7.3
Sample C Male 7.9
Sample D Male 6.7
Ventral hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.8
Sample A Female 9.6
Sample B Female 7.7
Sample C Male 7.8
Sample D Male 5.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 29.8
Min nTPM: 25.9
Sample A Male 27.4
Sample B Male 25.9
Sample C Female 29.6
Sample D Female 29.8
Hippocampal formation
nTPM: 33.6
Samples: 4

Max nTPM: 37.8
Min nTPM: 29.6
Sample A Male 37.8
Sample B Male 34.0
Sample C Female 33.1
Sample D Female 29.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71991840 Antisense, RP_051012_03_F01, Mouse strain C57BL/6J (56 days, male) 0.0

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