HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.9 nTPM
HPA Brain:163.2 nTPM
GTEx:22.9 nTPM
FANTOM5:162.9 Scaled Tags Per Million
Pig:68.6 nTPM
Mouse:51.4 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030289Antibody HPA030290Antibody HPA030291Antibody HPA030292
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells LowNot detectedMediumMedium








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 163.2
Sample id Sample description nTPM
Hippocampus
nTPM: 111.6
1898 Male, age 80, left hemisphere 163.6
2621 Female, age 67, right hemisphere 128.8
1855 Male, age 76, left hemisphere 109.2
1911 Female, age 85, right hemisphere 96.3
2529 Female, age 94, left hemisphere 93.9
2148 Female, age 91, left hemisphere 78.0
Dentate gyrus
nTPM: 113.2
2530 Female, age 94, left hemisphere 141.8
2010 Male, age 76, both hemispheres 124.8
1927 Female, age 91, both hemispheres 119.8
2246 Female, age 85, both hemispheres 108.0
2531 Female, age 67, both hemispheres 100.8
2528 Male, age 74, both hemispheres 83.7
Entorhinal gyrus
nTPM: 144.8
2764 Male, age 80, right hemisphere 170.5
2613 Female, age 94, left hemisphere 170.4
1938 Female, age 85, left hemisphere 164.3
1787 Male, age 76, left hemisphere 142.5
2686 Male, age 75, right hemisphere 118.1
2117 Female, age 91, right hemisphere 103.4
Hippocampus, CA1
nTPM: 129.4
2749 Male, age 80, left hemisphere 240.0
1873 Female, age 85, both hemispheres 114.7
2527 Male, age 74, both hemispheres 110.9
2082 Female, age 91, right hemisphere 96.0
2045 Male, age 76, both hemispheres 85.4
Hippocampus, CA2
nTPM: 121.6
1892 Male, age 76, both hemispheres 161.3
1963 Male, age 80, left hemisphere 140.6
2437 Female, age 94, left hemisphere 123.4
2249 Male, age 74, both hemispheres 104.4
1940 Female, age 85, left hemisphere 103.3
2113 Female, age 91, right hemisphere 96.6
Hippocampus, CA3
nTPM: 124.3
2137 Male, age 80, left hemisphere 199.2
1867 Male, age 76, both hemispheres 140.6
1891 Female, age 85, both hemispheres 121.6
2620 Female, age 94, left hemisphere 107.4
2861 Female, age 67, both hemispheres 92.7
2436 Male, age 74, both hemispheres 84.5
Parahippocampal cortex
nTPM: 138.5
1850 Male, age 80, both hemispheres 197.8
1990 Female, age 91, right hemisphere 164.6
1933 Female, age 85, both hemispheres 146.7
2245 Female, age 91, both hemispheres 135.5
2532 Female, age 72, left hemisphere 132.7
2693 Female, age 94, both hemispheres 129.4
2250 Female, age 67, right hemisphere 125.3
2018 Male, age 76, both hemispheres 123.6
2622 Female, age 67, right hemisphere 115.1
2692 Male, age 74, both hemispheres 114.3
Perirhinal gyrus
nTPM: 163.2
1847 Female, age 91, left hemisphere 198.2
1794 Male, age 80, right hemisphere 186.2
2848 Male, age 76, right hemisphere 149.7
1841 Female, age 85, right hemisphere 143.0
2521 Female, age 94, right hemisphere 138.8
Subiculum
nTPM: 130.2
1901 Male, age 80, both hemispheres 173.7
1977 Female, age 85, both hemispheres 151.9
2438 Female, age 94, left hemisphere 142.8
2042 Male, age 76, both hemispheres 126.4
2619 Male, age 74, both hemispheres 111.4
2729 Female, age 91, right hemisphere 74.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.9
Samples: 197

Max nTPM: 51.5
Min nTPM: 8.5
Std nTPM: 9.1
Median nTPM: 21.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 51.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 48.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 47.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 47.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 45.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 44.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 44.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 41.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 41.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 40.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 162.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.9
FF:10169-103B7 60 years, female 177.5
FF:10153-102I9 76 years, female 148.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.6
Pig sample Sample description nTPM
Subiculum
nTPM: 57.2
Samples: 4

Max nTPM: 71.6
Min nTPM: 49.3
Sample A Female 71.6
Sample B Female 49.3
Sample C Male 50.8
Sample D Male 56.9
Dorsal hippocampus
nTPM: 68.6
Samples: 4

Max nTPM: 79.3
Min nTPM: 55.3
Sample A Female 79.3
Sample B Female 72.9
Sample C Male 67.0
Sample D Male 55.3
Entorhinal cortex
nTPM: 68.6
Samples: 4

Max nTPM: 74.8
Min nTPM: 63.6
Sample A Female 67.9
Sample B Female 74.8
Sample C Male 63.6
Sample D Male 68.2
Ventral hippocampus
nTPM: 53.3
Samples: 4

Max nTPM: 61.1
Min nTPM: 44.9
Sample A Female 57.7
Sample B Female 49.4
Sample C Male 44.9
Sample D Male 61.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.4
Samples: 4

Max nTPM: 55.5
Min nTPM: 47.9
Sample A Male 47.9
Sample B Male 48.3
Sample C Female 54.0
Sample D Female 55.5
Hippocampal formation
nTPM: 48.0
Samples: 4

Max nTPM: 51.6
Min nTPM: 45.5
Sample A Male 51.6
Sample B Male 47.3
Sample C Female 47.7
Sample D Female 45.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
71281154 Antisense, RP_050818_02_C01, Mouse strain C57BL/6J (56 days, male) 2.0
77340496 Antisense, RP_070116_02_D08, Mouse strain C57BL/6J (56 days, male) 1.7

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