HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.8 nTPM
HPA Brain:13.9 nTPM
GTEx:10.8 nTPM
FANTOM5:31.9 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:13.6 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038623Antibody CAB004673
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
1911 Female, age 85, right hemisphere 17.8
2621 Female, age 67, right hemisphere 15.3
2148 Female, age 91, left hemisphere 13.6
2529 Female, age 94, left hemisphere 13.4
1855 Male, age 76, left hemisphere 12.0
1898 Male, age 80, left hemisphere 11.4
Dentate gyrus
nTPM: 12.5
2010 Male, age 76, both hemispheres 13.5
2246 Female, age 85, both hemispheres 13.4
1927 Female, age 91, both hemispheres 13.0
2530 Female, age 94, left hemisphere 12.1
2531 Female, age 67, both hemispheres 11.8
2528 Male, age 74, both hemispheres 11.1
Entorhinal gyrus
nTPM: 12.1
1787 Male, age 76, left hemisphere 13.3
2686 Male, age 75, right hemisphere 13.1
1938 Female, age 85, left hemisphere 12.6
2117 Female, age 91, right hemisphere 12.1
2613 Female, age 94, left hemisphere 10.8
2764 Male, age 80, right hemisphere 10.6
Hippocampus, CA1
nTPM: 13.4
2749 Male, age 80, left hemisphere 15.8
1873 Female, age 85, both hemispheres 14.7
2527 Male, age 74, both hemispheres 13.8
2082 Female, age 91, right hemisphere 12.8
2045 Male, age 76, both hemispheres 9.6
Hippocampus, CA2
nTPM: 13.2
1963 Male, age 80, left hemisphere 15.0
1940 Female, age 85, left hemisphere 14.3
2113 Female, age 91, right hemisphere 13.6
2249 Male, age 74, both hemispheres 13.0
1892 Male, age 76, both hemispheres 12.7
2437 Female, age 94, left hemisphere 10.7
Hippocampus, CA3
nTPM: 12.6
2137 Male, age 80, left hemisphere 15.3
2436 Male, age 74, both hemispheres 13.4
1891 Female, age 85, both hemispheres 13.1
2861 Female, age 67, both hemispheres 12.1
1867 Male, age 76, both hemispheres 11.6
2620 Female, age 94, left hemisphere 10.2
Parahippocampal cortex
nTPM: 12.4
2250 Female, age 67, right hemisphere 13.7
2622 Female, age 67, right hemisphere 13.4
2245 Female, age 91, both hemispheres 13.1
1933 Female, age 85, both hemispheres 13.0
2018 Male, age 76, both hemispheres 12.3
2692 Male, age 74, both hemispheres 12.3
2693 Female, age 94, both hemispheres 12.3
2532 Female, age 72, left hemisphere 11.9
1990 Female, age 91, right hemisphere 11.7
1850 Male, age 80, both hemispheres 10.3
Perirhinal gyrus
nTPM: 11.5
2521 Female, age 94, right hemisphere 12.5
1841 Female, age 85, right hemisphere 12.1
2848 Male, age 76, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.1
1794 Male, age 80, right hemisphere 9.7
Subiculum
nTPM: 12.6
2042 Male, age 76, both hemispheres 14.0
2438 Female, age 94, left hemisphere 12.9
2729 Female, age 91, right hemisphere 12.9
1977 Female, age 85, both hemispheres 12.2
2619 Male, age 74, both hemispheres 11.9
1901 Male, age 80, both hemispheres 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 20.0
Min nTPM: 3.4
Std nTPM: 3.0
Median nTPM: 10.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 18.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 18.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 17.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 17.2
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 17.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 17.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 16.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 16.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 16.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 16.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.9
FF:10153-102I9 76 years, female 39.0
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.1
Pig sample Sample description nTPM
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 15.3
Min nTPM: 13.1
Sample A Female 13.1
Sample B Female 14.5
Sample C Male 13.5
Sample D Male 15.3
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 17.8
Min nTPM: 12.0
Sample A Female 12.0
Sample B Female 13.5
Sample C Male 13.0
Sample D Male 17.8
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 14.9
Min nTPM: 13.4
Sample A Female 13.9
Sample B Female 13.4
Sample C Male 13.6
Sample D Male 14.9
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.3
Sample A Female 12.3
Sample B Female 15.1
Sample C Male 13.5
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 12.1
Min nTPM: 11.1
Sample A Male 12.1
Sample B Male 11.1
Sample C Female 11.4
Sample D Female 11.5
Hippocampal formation
nTPM: 13.6
Samples: 4

Max nTPM: 15.6
Min nTPM: 9.0
Sample A Male 15.6
Sample B Male 14.3
Sample C Female 9.0
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
512772 Antisense, RP_040809_02_D12, Mouse strain C57BL/6J (56 days, male) 9.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org