HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:44.4 nTPM
HPA Brain:40.4 nTPM
GTEx:44.4 nTPM
FANTOM5:98.0 Scaled Tags Per Million
Pig:68.8 nTPM
Mouse:97.5 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056981Antibody CAB012986
Glial cells LowHigh
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.4
Sample id Sample description nTPM
Hippocampus
nTPM: 39.1
1898 Male, age 80, left hemisphere 50.8
1855 Male, age 76, left hemisphere 40.1
1911 Female, age 85, right hemisphere 37.8
2529 Female, age 94, left hemisphere 37.7
2148 Female, age 91, left hemisphere 35.4
2621 Female, age 67, right hemisphere 32.6
Dentate gyrus
nTPM: 33.4
1927 Female, age 91, both hemispheres 41.5
2010 Male, age 76, both hemispheres 36.4
2530 Female, age 94, left hemisphere 33.8
2528 Male, age 74, both hemispheres 32.7
2246 Female, age 85, both hemispheres 29.0
2531 Female, age 67, both hemispheres 27.0
Entorhinal gyrus
nTPM: 33.6
1938 Female, age 85, left hemisphere 44.1
2764 Male, age 80, right hemisphere 39.0
2117 Female, age 91, right hemisphere 37.1
1787 Male, age 76, left hemisphere 31.6
2686 Male, age 75, right hemisphere 29.9
2613 Female, age 94, left hemisphere 19.7
Hippocampus, CA1
nTPM: 40.4
2749 Male, age 80, left hemisphere 56.6
1873 Female, age 85, both hemispheres 43.6
2045 Male, age 76, both hemispheres 36.1
2527 Male, age 74, both hemispheres 34.9
2082 Female, age 91, right hemisphere 30.5
Hippocampus, CA2
nTPM: 40.0
1892 Male, age 76, both hemispheres 50.5
1963 Male, age 80, left hemisphere 46.0
2249 Male, age 74, both hemispheres 45.3
1940 Female, age 85, left hemisphere 36.9
2113 Female, age 91, right hemisphere 32.3
2437 Female, age 94, left hemisphere 29.1
Hippocampus, CA3
nTPM: 38.0
2137 Male, age 80, left hemisphere 49.0
1867 Male, age 76, both hemispheres 47.4
1891 Female, age 85, both hemispheres 40.3
2436 Male, age 74, both hemispheres 37.2
2620 Female, age 94, left hemisphere 27.4
2861 Female, age 67, both hemispheres 26.8
Parahippocampal cortex
nTPM: 33.2
1933 Female, age 85, both hemispheres 42.3
1850 Male, age 80, both hemispheres 41.0
2250 Female, age 67, right hemisphere 37.2
2245 Female, age 91, both hemispheres 35.8
1990 Female, age 91, right hemisphere 33.6
2018 Male, age 76, both hemispheres 31.0
2692 Male, age 74, both hemispheres 29.9
2532 Female, age 72, left hemisphere 29.0
2693 Female, age 94, both hemispheres 26.8
2622 Female, age 67, right hemisphere 25.5
Perirhinal gyrus
nTPM: 35.6
1847 Female, age 91, left hemisphere 40.9
1794 Male, age 80, right hemisphere 39.4
1841 Female, age 85, right hemisphere 38.7
2521 Female, age 94, right hemisphere 31.6
2848 Male, age 76, right hemisphere 27.0
Subiculum
nTPM: 33.0
1901 Male, age 80, both hemispheres 39.8
2042 Male, age 76, both hemispheres 37.9
1977 Female, age 85, both hemispheres 35.5
2729 Female, age 91, right hemisphere 31.7
2619 Male, age 74, both hemispheres 27.8
2438 Female, age 94, left hemisphere 25.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.4
Samples: 197

Max nTPM: 115.4
Min nTPM: 15.3
Std nTPM: 11.8
Median nTPM: 43.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 115.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 100.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 81.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 78.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 70.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 67.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 61.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 60.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 60.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 59.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.0
FF:10153-102I9 76 years, female 132.7
FF:10169-103B7 60 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.8
Pig sample Sample description nTPM
Subiculum
nTPM: 58.9
Samples: 4

Max nTPM: 75.9
Min nTPM: 49.8
Sample A Female 75.9
Sample B Female 58.8
Sample C Male 49.8
Sample D Male 51.2
Dorsal hippocampus
nTPM: 68.8
Samples: 4

Max nTPM: 84.9
Min nTPM: 56.3
Sample A Female 84.9
Sample B Female 73.4
Sample C Male 60.7
Sample D Male 56.3
Entorhinal cortex
nTPM: 54.2
Samples: 4

Max nTPM: 66.7
Min nTPM: 42.3
Sample A Female 55.6
Sample B Female 66.7
Sample C Male 52.0
Sample D Male 42.3
Ventral hippocampus
nTPM: 59.4
Samples: 4

Max nTPM: 62.6
Min nTPM: 56.6
Sample A Female 62.6
Sample B Female 60.8
Sample C Male 56.6
Sample D Male 57.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.1
Samples: 4

Max nTPM: 92.6
Min nTPM: 85.7
Sample A Male 85.7
Sample B Male 90.9
Sample C Female 92.6
Sample D Female 87.3
Hippocampal formation
nTPM: 97.6
Samples: 4

Max nTPM: 106.6
Min nTPM: 92.2
Sample A Male 106.6
Sample B Male 92.2
Sample C Female 97.2
Sample D Female 94.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
69873648 Antisense, RP_050512_01_F09, Mouse strain C57BL/6J (56 days, male) 8.3

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