HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:217.4 nTPM
HPA Brain:148.9 nTPM
GTEx:217.4 nTPM
FANTOM5:237.7 Scaled Tags Per Million
Pig:206.7 nTPM
Mouse:184.7 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 148.9
Sample id Sample description nTPM
Hippocampus
nTPM: 138.1
1898 Male, age 80, left hemisphere 169.1
1855 Male, age 76, left hemisphere 165.7
2621 Female, age 67, right hemisphere 134.9
1911 Female, age 85, right hemisphere 125.8
2529 Female, age 94, left hemisphere 123.4
2148 Female, age 91, left hemisphere 109.9
Dentate gyrus
nTPM: 123.7
2010 Male, age 76, both hemispheres 169.8
1927 Female, age 91, both hemispheres 141.3
2246 Female, age 85, both hemispheres 129.5
2530 Female, age 94, left hemisphere 112.8
2528 Male, age 74, both hemispheres 112.2
2531 Female, age 67, both hemispheres 76.9
Entorhinal gyrus
nTPM: 105.3
1938 Female, age 85, left hemisphere 146.3
1787 Male, age 76, left hemisphere 116.7
2117 Female, age 91, right hemisphere 107.7
2764 Male, age 80, right hemisphere 96.5
2613 Female, age 94, left hemisphere 85.1
2686 Male, age 75, right hemisphere 79.4
Hippocampus, CA1
nTPM: 148.9
2749 Male, age 80, left hemisphere 205.6
1873 Female, age 85, both hemispheres 166.6
2045 Male, age 76, both hemispheres 135.7
2527 Male, age 74, both hemispheres 129.5
2082 Female, age 91, right hemisphere 107.4
Hippocampus, CA2
nTPM: 133.2
1892 Male, age 76, both hemispheres 164.6
1963 Male, age 80, left hemisphere 158.7
2249 Male, age 74, both hemispheres 149.7
1940 Female, age 85, left hemisphere 118.0
2113 Female, age 91, right hemisphere 104.2
2437 Female, age 94, left hemisphere 104.0
Hippocampus, CA3
nTPM: 126.2
2137 Male, age 80, left hemisphere 165.0
2436 Male, age 74, both hemispheres 151.4
1867 Male, age 76, both hemispheres 142.4
1891 Female, age 85, both hemispheres 122.4
2620 Female, age 94, left hemisphere 101.5
2861 Female, age 67, both hemispheres 74.5
Parahippocampal cortex
nTPM: 121.1
1850 Male, age 80, both hemispheres 145.7
1933 Female, age 85, both hemispheres 141.5
2018 Male, age 76, both hemispheres 134.9
2250 Female, age 67, right hemisphere 134.5
2245 Female, age 91, both hemispheres 125.2
1990 Female, age 91, right hemisphere 122.6
2532 Female, age 72, left hemisphere 118.6
2693 Female, age 94, both hemispheres 106.1
2692 Male, age 74, both hemispheres 91.6
2622 Female, age 67, right hemisphere 90.2
Perirhinal gyrus
nTPM: 143.2
1847 Female, age 91, left hemisphere 166.0
1841 Female, age 85, right hemisphere 165.2
1794 Male, age 80, right hemisphere 135.5
2521 Female, age 94, right hemisphere 127.7
2848 Male, age 76, right hemisphere 121.6
Subiculum
nTPM: 125.7
2438 Female, age 94, left hemisphere 153.3
2042 Male, age 76, both hemispheres 137.6
1901 Male, age 80, both hemispheres 129.0
1977 Female, age 85, both hemispheres 118.8
2619 Male, age 74, both hemispheres 108.3
2729 Female, age 91, right hemisphere 107.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 217.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 217.4
Samples: 197

Max nTPM: 462.4
Min nTPM: 120.6
Std nTPM: 52.7
Median nTPM: 206.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 462.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 398.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 388.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 374.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 344.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 341.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 337.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 326.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 326.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 318.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 316.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 237.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.7
FF:10169-103B7 60 years, female 289.7
FF:10153-102I9 76 years, female 185.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 206.7
Pig sample Sample description nTPM
Subiculum
nTPM: 195.2
Samples: 4

Max nTPM: 253.9
Min nTPM: 167.3
Sample A Female 253.9
Sample B Female 175.3
Sample C Male 167.3
Sample D Male 184.1
Dorsal hippocampus
nTPM: 201.8
Samples: 4

Max nTPM: 257.4
Min nTPM: 168.6
Sample A Female 257.4
Sample B Female 173.6
Sample C Male 207.6
Sample D Male 168.6
Entorhinal cortex
nTPM: 206.7
Samples: 4

Max nTPM: 224.2
Min nTPM: 175.6
Sample A Female 203.0
Sample B Female 224.2
Sample C Male 224.1
Sample D Male 175.6
Ventral hippocampus
nTPM: 178.8
Samples: 4

Max nTPM: 198.1
Min nTPM: 150.9
Sample A Female 198.1
Sample B Female 150.9
Sample C Male 184.6
Sample D Male 181.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 184.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.3
Samples: 4

Max nTPM: 181.8
Min nTPM: 162.5
Sample A Male 169.4
Sample B Male 163.6
Sample C Female 181.8
Sample D Female 162.5
Hippocampal formation
nTPM: 184.7
Samples: 4

Max nTPM: 200.8
Min nTPM: 171.1
Sample A Male 187.7
Sample B Male 171.1
Sample C Female 200.8
Sample D Female 179.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
69885624 Antisense, RP_050512_03_A07, Mouse strain C57BL/6J (56 days, male) 17.2

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