HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:23.4 nTPM
HPA Brain:57.4 nTPM
GTEx:23.4 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Pig:64.1 nTPM
Mouse:62.3 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029045Antibody HPA029046
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.3
1898 Male, age 80, left hemisphere 48.8
2621 Female, age 67, right hemisphere 44.8
2148 Female, age 91, left hemisphere 40.0
1855 Male, age 76, left hemisphere 38.8
2529 Female, age 94, left hemisphere 36.5
1911 Female, age 85, right hemisphere 33.0
Dentate gyrus
nTPM: 40.3
1927 Female, age 91, both hemispheres 51.5
2530 Female, age 94, left hemisphere 42.8
2010 Male, age 76, both hemispheres 39.0
2531 Female, age 67, both hemispheres 37.1
2246 Female, age 85, both hemispheres 36.8
2528 Male, age 74, both hemispheres 34.8
Entorhinal gyrus
nTPM: 46.2
2613 Female, age 94, left hemisphere 57.2
2764 Male, age 80, right hemisphere 50.9
1938 Female, age 85, left hemisphere 48.0
1787 Male, age 76, left hemisphere 46.4
2686 Male, age 75, right hemisphere 40.0
2117 Female, age 91, right hemisphere 34.8
Hippocampus, CA1
nTPM: 43.7
2749 Male, age 80, left hemisphere 61.5
2045 Male, age 76, both hemispheres 40.8
1873 Female, age 85, both hemispheres 40.7
2527 Male, age 74, both hemispheres 39.7
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 41.8
1892 Male, age 76, both hemispheres 53.7
1963 Male, age 80, left hemisphere 45.6
2437 Female, age 94, left hemisphere 44.5
1940 Female, age 85, left hemisphere 38.9
2249 Male, age 74, both hemispheres 36.4
2113 Female, age 91, right hemisphere 31.9
Hippocampus, CA3
nTPM: 45.8
2137 Male, age 80, left hemisphere 52.6
2620 Female, age 94, left hemisphere 51.5
2861 Female, age 67, both hemispheres 47.8
1867 Male, age 76, both hemispheres 44.7
2436 Male, age 74, both hemispheres 42.6
1891 Female, age 85, both hemispheres 36.0
Parahippocampal cortex
nTPM: 45.5
1850 Male, age 80, both hemispheres 54.7
2693 Female, age 94, both hemispheres 52.3
2245 Female, age 91, both hemispheres 49.2
1933 Female, age 85, both hemispheres 47.9
2622 Female, age 67, right hemisphere 45.2
1990 Female, age 91, right hemisphere 44.1
2532 Female, age 72, left hemisphere 41.8
2250 Female, age 67, right hemisphere 40.8
2692 Male, age 74, both hemispheres 40.7
2018 Male, age 76, both hemispheres 37.9
Perirhinal gyrus
nTPM: 57.4
1847 Female, age 91, left hemisphere 68.8
1794 Male, age 80, right hemisphere 60.9
1841 Female, age 85, right hemisphere 55.3
2521 Female, age 94, right hemisphere 55.1
2848 Male, age 76, right hemisphere 47.2
Subiculum
nTPM: 40.4
2438 Female, age 94, left hemisphere 49.0
2619 Male, age 74, both hemispheres 44.4
1901 Male, age 80, both hemispheres 44.1
1977 Female, age 85, both hemispheres 41.0
2729 Female, age 91, right hemisphere 32.1
2042 Male, age 76, both hemispheres 31.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 44.3
Min nTPM: 6.1
Std nTPM: 7.5
Median nTPM: 22.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 44.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 42.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 40.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 40.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 39.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 37.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 37.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 36.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 36.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.4
FF:10169-103B7 60 years, female 83.0
FF:10153-102I9 76 years, female 57.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.1
Pig sample Sample description nTPM
Subiculum
nTPM: 57.0
Samples: 4

Max nTPM: 74.6
Min nTPM: 47.4
Sample A Female 74.6
Sample B Female 48.7
Sample C Male 57.2
Sample D Male 47.4
Dorsal hippocampus
nTPM: 64.1
Samples: 4

Max nTPM: 79.3
Min nTPM: 51.9
Sample A Female 79.3
Sample B Female 66.6
Sample C Male 58.6
Sample D Male 51.9
Entorhinal cortex
nTPM: 57.1
Samples: 4

Max nTPM: 66.9
Min nTPM: 48.7
Sample A Female 66.9
Sample B Female 56.8
Sample C Male 55.9
Sample D Male 48.7
Ventral hippocampus
nTPM: 64.1
Samples: 4

Max nTPM: 81.4
Min nTPM: 42.2
Sample A Female 69.0
Sample B Female 42.2
Sample C Male 81.4
Sample D Male 63.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 65.1
Min nTPM: 54.5
Sample A Male 56.9
Sample B Male 54.5
Sample C Female 58.9
Sample D Female 65.1
Hippocampal formation
nTPM: 62.3
Samples: 4

Max nTPM: 65.9
Min nTPM: 61.1
Sample A Male 61.1
Sample B Male 61.2
Sample C Female 65.9
Sample D Female 61.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
74059351 Antisense, RP_051214_02_C05, Mouse strain C57BL/6J (56 days, male) 6.5
74047908 Antisense, RP_051214_02_C05, Mouse strain C57BL/6J (56 days, male) 4.5

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