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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
2251.4
nTPM
FANTOM5:
2563.9
Scaled Tags Per Million
Pig:
1050.7
nTPM
Allen mouse:
8.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
2251.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1437.7
2301
Female, age 85, both hemispheres
2474.6
2090
Male, age 80, both hemispheres
1257.4
2188
Female, age 91, both hemispheres
1087.5
1984
Male, age 76, both hemispheres
931.5
Dorsal cochlear nucleus nTPM: 1443.7
2187
Female, age 91, both hemispheres
2014.7
2802
Male, age 74, right hemisphere
1515.7
2370
Male, age 61, both hemispheres
1427.8
2378
Male, age 80, both hemispheres
1215.8
2058
Male, age 76, both hemispheres
1044.5
Dorsal tegmental nucleus nTPM: 2140.2
2083
Male, age 80, both hemispheres
2302.6
1936
Male, age 76, left hemisphere
2202.4
2326
Male, age 74, both hemispheres
2037.4
2358
Male, age 61, both hemispheres
2018.2
Dorsolateral tegmental area nTPM: 1836.7
2360
Male, age 74, both hemispheres
2047.5
2654
Male, age 80, both hemispheres
2002.0
2141
Male, age 76, both hemispheres
1968.4
2337
Male, age 61, both hemispheres
1588.2
2751
Female, age 85, both hemispheres
1577.2
Kolliker-Fuse nucleus nTPM: 2251.4
2315
Male, age 76, right hemisphere
4044.7
2163
Male, age 80, both hemispheres
1745.3
2793
Female, age 91, left hemisphere
964.2
Lateral lemniscal nuclei nTPM: 854.4
2746
Female, age 85, left hemisphere
1174.7
2169
Male, age 76, both hemispheres
932.1
2320
Female, age 91, left hemisphere
763.1
2036
Male, age 80, both hemispheres
721.4
2453
Male, age 74, right hemisphere
680.8
Lateral parabrachial nucleus nTPM: 1797.7
2792
Male, age 76, both hemispheres
2438.3
2139
Female, age 85, right hemisphere
1731.3
2013
Male, age 80, both hemispheres
1594.2
2790
Male, age 61, both hemispheres
1426.9
Lateral vestibular nucleus nTPM: 2011.9
2311
Male, age 80, both hemispheres
2389.3
2184
Male, age 76, both hemispheres
1634.5
Locus coeruleus nTPM: 1916.4
2317
Female, age 72, unknown
2240.8
2123
Female, age 91, both hemispheres
2126.1
2162
Male, age 80, both hemispheres
2064.7
1980
Male, age 76, both hemispheres
2007.0
2720
Male, age 74, both hemispheres
1838.5
2014
Male, age 55, unknown
1623.5
2788
Male, age 74, unknown
1514.6
Medial parabrachial nucleus nTPM: 1780.6
2170
Female, age 91, both hemispheres
1940.3
2156
Male, age 61, both hemispheres
1913.4
2786
Male, age 76, both hemispheres
1846.1
2854
Male, age 80, both hemispheres
1689.0
2463
Female, age 85, right hemisphere
1513.9
Medial periolivary nuclei nTPM: 1055.1
2791
Male, age 74, right hemisphere
1283.3
2063
Male, age 76, both hemispheres
1087.5
2458
Female, age 91, both hemispheres
1008.7
2081
Male, age 80, both hemispheres
962.0
2171
Female, age 85, both hemispheres
934.2
Motor facial nucleus nTPM: 1236.0
2126
Male, age 61, both hemispheres
1511.3
2795
Female, age 91, both hemispheres
1419.6
2697
Female, age 85, both hemispheres
1287.4
2365
Male, age 74, right hemisphere
1193.5
2062
Male, age 76, both hemispheres
1162.1
2327
Male, age 80, both hemispheres
842.1
Motor trigeminal nucleus nTPM: 1224.1
2335
Male, age 61, both hemispheres
1609.4
2309
Male, age 76, both hemispheres
1599.1
2321
Female, age 91, both hemispheres
1198.1
2560
Male, age 74, both hemispheres
923.4
2079
Male, age 80, both hemispheres
790.4
Nuclei of the trapezoid body nTPM: 1168.5
2368
Female, age 91, both hemispheres
1303.0
1983
Male, age 76, both hemispheres
1287.1
2166
Male, age 80, both hemispheres
1149.9
2159
Male, age 61, both hemispheres
1128.8
2735
Female, age 85, both hemispheres
973.4
Nucleus raphe magnus nTPM: 992.6
2328
Male, age 80, both hemispheres
1144.8
2455
Male, age 74, both hemispheres
1094.0
2160
Male, age 61, both hemispheres
1069.3
2051
Male, age 76, both hemispheres
1046.2
2459
Female, age 91, both hemispheres
807.0
2172
Female, age 85, both hemispheres
794.3
Paramedian reticular nucleus nTPM: 1444.3
2057
Male, age 80, both hemispheres
1746.2
2313
Male, age 61, both hemispheres
1451.6
2052
Male, age 76, both hemispheres
1322.9
2050
Female, age 85, both hemispheres
1256.6
Pedunculopontine tegmental nucleus nTPM: 2063.2
2334
Male, age 80, both hemispheres
2335.1
1921
Female, age 85, both hemispheres
2200.6
2338
Male, age 61, both hemispheres
1654.0
Pontine nuclei nTPM: 899.7
2115
Male, age 80, left hemisphere
1129.3
2109
Female, age 72, unknown
979.9
1968
Male, age 76, left hemisphere
922.4
1863
Male, age 55, unknown
891.8
2787
Female, age 85, both hemispheres
862.8
2319
Female, age 91, both hemispheres
846.9
2727
Male, age 61, right hemisphere
829.3
2454
Male, age 74, left hemisphere
735.4
Pontine raphe nucleus nTPM: 1641.1
2853
Male, age 76, midline
2175.2
2122
Female, age 85, midline
1107.0
Posteroventral cochlear nucleus nTPM: 1324.2
2752
Female, age 85, both hemispheres
1737.1
2371
Male, age 61, both hemispheres
1589.3
2070
Male, age 76, both hemispheres
1218.0
2341
Male, age 80, both hemispheres
1140.8
2135
Female, age 91, both hemispheres
936.0
Principal sensory trigeminal nucleus nTPM: 1265.2
2324
Male, age 76, both hemispheres
2083.0
2158
Male, age 61, both hemispheres
1265.5
2008
Male, age 80, left hemisphere
907.0
2367
Female, age 91, left hemisphere
805.3
Reticular pontine nucleus, caudal nTPM: 969.3
2092
Male, age 76, both hemispheres
1301.8
2559
Male, age 74, both hemispheres
957.1
2457
Female, age 91, both hemispheres
855.0
2332
Male, age 80, right hemisphere
763.4
Reticular pontine nucleus, oral nTPM: 1336.4
1939
Male, age 80, both hemispheres
1928.4
2167
Male, age 76, both hemispheres
1833.1
2012
Female, age 85, both hemispheres
1207.8
2366
Female, age 91, both hemispheres
864.3
2361
Male, age 74, both hemispheres
848.6
Reticulotegmental nucleus nTPM: 1466.2
2322
Female, age 91, both hemispheres
1684.5
2333
Male, age 80, both hemispheres
1577.8
2325
Male, age 76, both hemispheres
1461.6
2452
Male, age 74, both hemispheres
1141.0
Spinal trigeminal nucleus, oral nTPM: 1202.6
2737
Female, age 85, both hemispheres
1367.6
2164
Male, age 80, both hemispheres
1278.7
1978
Male, age 76, both hemispheres
961.5
Subcoeruleus area nTPM: 1584.6
2323
Female, age 91, left hemisphere
1882.6
2451
Male, age 74, both hemispheres
1757.6
1958
Male, age 80, both hemispheres
1602.2
2369
Female, age 85, left hemisphere
1578.3
2089
Male, age 76, left hemisphere
1102.2
Superior olive nTPM: 1086.7
2364
Male, age 74, right hemisphere
1391.6
2561
Female, age 91, both hemispheres
1071.6
2020
Male, age 76, both hemispheres
1007.2
2329
Male, age 80, right hemisphere
1001.9
1875
Female, age 85, both hemispheres
961.2
Ventral periolivary nuclei nTPM: 1048.7
2130
Female, age 85, both hemispheres
1215.9
2165
Male, age 80, both hemispheres
1141.8
2023
Male, age 76, both hemispheres
957.8
2794
Female, age 91, left hemisphere
879.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 1296.2
2359
Male, age 61, both hemispheres
1880.7
2840
Female, age 85, both hemispheres
1473.2
2456
Female, age 91, both hemispheres
1188.8
1959
Male, age 76, both hemispheres
1140.9
2161
Male, age 80, both hemispheres
1123.1
2449
Male, age 74, both hemispheres
970.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1050.7
Pig sample
Sample description
nTPM
Pons nTPM: 1050.7
Samples: 4
Max nTPM: 1251.8
Min nTPM: 819.0
Sample A
Female
1039.9
Sample B
Female
819.0
Sample C
Male
1091.9
Sample D
Male
1251.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
