HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:69.0 nTPM
HPA Brain:36.2 nTPM
GTEx:69.0 nTPM
FANTOM5:108.7 Scaled Tags Per Million
Pig:69.4 nTPM
Mouse:48.8 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036557
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.2
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
1898 Male, age 80, left hemisphere 50.1
1855 Male, age 76, left hemisphere 39.6
2529 Female, age 94, left hemisphere 34.0
2621 Female, age 67, right hemisphere 33.5
2148 Female, age 91, left hemisphere 32.3
1911 Female, age 85, right hemisphere 26.3
Dentate gyrus
nTPM: 31.6
2010 Male, age 76, both hemispheres 39.4
2530 Female, age 94, left hemisphere 36.2
1927 Female, age 91, both hemispheres 34.5
2246 Female, age 85, both hemispheres 31.6
2531 Female, age 67, both hemispheres 26.4
2528 Male, age 74, both hemispheres 21.7
Entorhinal gyrus
nTPM: 30.9
2764 Male, age 80, right hemisphere 36.3
1938 Female, age 85, left hemisphere 34.6
2117 Female, age 91, right hemisphere 31.7
1787 Male, age 76, left hemisphere 29.4
2613 Female, age 94, left hemisphere 26.9
2686 Male, age 75, right hemisphere 26.7
Hippocampus, CA1
nTPM: 36.0
2749 Male, age 80, left hemisphere 52.8
2527 Male, age 74, both hemispheres 35.4
1873 Female, age 85, both hemispheres 35.1
2045 Male, age 76, both hemispheres 33.3
2082 Female, age 91, right hemisphere 23.4
Hippocampus, CA2
nTPM: 35.0
1892 Male, age 76, both hemispheres 49.1
1963 Male, age 80, left hemisphere 43.9
2249 Male, age 74, both hemispheres 31.0
1940 Female, age 85, left hemisphere 30.8
2437 Female, age 94, left hemisphere 29.9
2113 Female, age 91, right hemisphere 25.5
Hippocampus, CA3
nTPM: 30.0
1867 Male, age 76, both hemispheres 39.4
2137 Male, age 80, left hemisphere 36.4
1891 Female, age 85, both hemispheres 27.8
2861 Female, age 67, both hemispheres 26.5
2436 Male, age 74, both hemispheres 25.8
2620 Female, age 94, left hemisphere 24.1
Parahippocampal cortex
nTPM: 31.5
1850 Male, age 80, both hemispheres 41.1
2245 Female, age 91, both hemispheres 37.9
1933 Female, age 85, both hemispheres 35.7
1990 Female, age 91, right hemisphere 35.1
2692 Male, age 74, both hemispheres 31.4
2532 Female, age 72, left hemisphere 29.3
2622 Female, age 67, right hemisphere 28.3
2018 Male, age 76, both hemispheres 26.9
2693 Female, age 94, both hemispheres 25.1
2250 Female, age 67, right hemisphere 23.8
Perirhinal gyrus
nTPM: 36.2
1794 Male, age 80, right hemisphere 47.0
1847 Female, age 91, left hemisphere 40.5
1841 Female, age 85, right hemisphere 32.5
2521 Female, age 94, right hemisphere 30.6
2848 Male, age 76, right hemisphere 30.5
Subiculum
nTPM: 31.0
1901 Male, age 80, both hemispheres 40.2
2438 Female, age 94, left hemisphere 36.7
2042 Male, age 76, both hemispheres 29.6
2619 Male, age 74, both hemispheres 29.5
1977 Female, age 85, both hemispheres 28.7
2729 Female, age 91, right hemisphere 21.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.0
Samples: 197

Max nTPM: 128.1
Min nTPM: 39.3
Std nTPM: 15.8
Median nTPM: 66.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 128.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 119.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 117.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 111.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 103.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 102.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 100.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 99.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 97.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.7
FF:10169-103B7 60 years, female 121.5
FF:10153-102I9 76 years, female 95.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.4
Pig sample Sample description nTPM
Subiculum
nTPM: 62.8
Samples: 4

Max nTPM: 77.7
Min nTPM: 57.2
Sample A Female 77.7
Sample B Female 58.1
Sample C Male 58.2
Sample D Male 57.2
Dorsal hippocampus
nTPM: 69.5
Samples: 4

Max nTPM: 82.1
Min nTPM: 54.0
Sample A Female 82.1
Sample B Female 64.5
Sample C Male 77.2
Sample D Male 54.0
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 73.7
Min nTPM: 58.4
Sample A Female 67.8
Sample B Female 73.7
Sample C Male 62.8
Sample D Male 58.4
Ventral hippocampus
nTPM: 61.1
Samples: 4

Max nTPM: 71.8
Min nTPM: 52.6
Sample A Female 62.1
Sample B Female 52.6
Sample C Male 57.7
Sample D Male 71.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.7
Samples: 4

Max nTPM: 47.9
Min nTPM: 45.1
Sample A Male 45.1
Sample B Male 47.9
Sample C Female 47.7
Sample D Female 46.1
Hippocampal formation
nTPM: 48.8
Samples: 4

Max nTPM: 54.1
Min nTPM: 46.1
Sample A Male 54.1
Sample B Male 47.8
Sample C Female 46.1
Sample D Female 47.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
70429465 Antisense, RP_050614_01_G02, Mouse strain C57BL/6J (56 days, male) 9.8

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