HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:192.5 nTPM
HPA Brain:170.2 nTPM
GTEx:192.5 nTPM
FANTOM5:183.7 Scaled Tags Per Million
Pig:86.1 nTPM
Mouse:30.0 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017519
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 170.2
Sample id Sample description nTPM
Hippocampus
nTPM: 159.9
2529 Female, age 94, left hemisphere 189.0
1911 Female, age 85, right hemisphere 177.7
1855 Male, age 76, left hemisphere 173.9
2621 Female, age 67, right hemisphere 147.3
1898 Male, age 80, left hemisphere 138.0
2148 Female, age 91, left hemisphere 133.6
Dentate gyrus
nTPM: 157.9
2530 Female, age 94, left hemisphere 224.9
2010 Male, age 76, both hemispheres 198.7
2528 Male, age 74, both hemispheres 152.8
2246 Female, age 85, both hemispheres 139.6
2531 Female, age 67, both hemispheres 133.4
1927 Female, age 91, both hemispheres 98.2
Entorhinal gyrus
nTPM: 138.0
2117 Female, age 91, right hemisphere 188.5
2686 Male, age 75, right hemisphere 167.2
2764 Male, age 80, right hemisphere 133.7
1938 Female, age 85, left hemisphere 118.0
1787 Male, age 76, left hemisphere 115.5
2613 Female, age 94, left hemisphere 105.4
Hippocampus, CA1
nTPM: 132.5
2527 Male, age 74, both hemispheres 154.0
2082 Female, age 91, right hemisphere 146.0
1873 Female, age 85, both hemispheres 143.8
2045 Male, age 76, both hemispheres 126.3
2749 Male, age 80, left hemisphere 92.5
Hippocampus, CA2
nTPM: 144.2
1963 Male, age 80, left hemisphere 165.7
2113 Female, age 91, right hemisphere 163.4
2249 Male, age 74, both hemispheres 161.2
2437 Female, age 94, left hemisphere 139.1
1940 Female, age 85, left hemisphere 125.8
1892 Male, age 76, both hemispheres 110.1
Hippocampus, CA3
nTPM: 127.2
1891 Female, age 85, both hemispheres 187.3
1867 Male, age 76, both hemispheres 164.4
2620 Female, age 94, left hemisphere 107.7
2861 Female, age 67, both hemispheres 106.2
2436 Male, age 74, both hemispheres 103.6
2137 Male, age 80, left hemisphere 93.7
Parahippocampal cortex
nTPM: 126.3
2018 Male, age 76, both hemispheres 172.8
2692 Male, age 74, both hemispheres 170.5
2532 Female, age 72, left hemisphere 155.0
1990 Female, age 91, right hemisphere 127.7
2245 Female, age 91, both hemispheres 123.1
1933 Female, age 85, both hemispheres 115.4
1850 Male, age 80, both hemispheres 114.6
2622 Female, age 67, right hemisphere 111.4
2693 Female, age 94, both hemispheres 90.2
2250 Female, age 67, right hemisphere 82.3
Perirhinal gyrus
nTPM: 84.2
2848 Male, age 76, right hemisphere 95.8
1847 Female, age 91, left hemisphere 84.5
1794 Male, age 80, right hemisphere 83.3
2521 Female, age 94, right hemisphere 83.1
1841 Female, age 85, right hemisphere 74.4
Subiculum
nTPM: 170.2
2042 Male, age 76, both hemispheres 224.2
2438 Female, age 94, left hemisphere 180.0
1901 Male, age 80, both hemispheres 172.5
2729 Female, age 91, right hemisphere 157.5
1977 Female, age 85, both hemispheres 144.0
2619 Male, age 74, both hemispheres 142.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 192.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 192.5
Samples: 197

Max nTPM: 694.9
Min nTPM: 37.6
Std nTPM: 97.2
Median nTPM: 171.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 694.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 567.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 501.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 496.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 460.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 445.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 423.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 399.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 397.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 373.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 359.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 183.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 183.7
FF:10153-102I9 76 years, female 233.4
FF:10169-103B7 60 years, female 133.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.1
Pig sample Sample description nTPM
Subiculum
nTPM: 45.8
Samples: 4

Max nTPM: 53.4
Min nTPM: 38.0
Sample A Female 53.4
Sample B Female 43.5
Sample C Male 38.0
Sample D Male 48.3
Dorsal hippocampus
nTPM: 84.7
Samples: 4

Max nTPM: 114.1
Min nTPM: 58.8
Sample A Female 114.1
Sample B Female 74.6
Sample C Male 91.4
Sample D Male 58.8
Entorhinal cortex
nTPM: 86.1
Samples: 4

Max nTPM: 115.6
Min nTPM: 66.3
Sample A Female 78.2
Sample B Female 115.6
Sample C Male 84.4
Sample D Male 66.3
Ventral hippocampus
nTPM: 59.2
Samples: 4

Max nTPM: 75.0
Min nTPM: 44.9
Sample A Female 59.1
Sample B Female 44.9
Sample C Male 57.7
Sample D Male 75.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 33.6
Min nTPM: 25.9
Sample A Male 33.6
Sample B Male 26.8
Sample C Female 31.4
Sample D Female 25.9
Hippocampal formation
nTPM: 30.0
Samples: 4

Max nTPM: 31.0
Min nTPM: 28.5
Sample A Male 31.0
Sample B Male 28.5
Sample C Female 30.2
Sample D Female 30.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
79556599 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 14.8
79360312 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 11.4

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