HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:74.6 nTPM
HPA Brain:87.1 nTPM
GTEx:74.6 nTPM
FANTOM5:36.7 Scaled Tags Per Million
Pig:153.6 nTPM
Mouse:266.5 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071779
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.1
Sample id Sample description nTPM
Hippocampus
nTPM: 75.1
2621 Female, age 67, right hemisphere 93.5
2529 Female, age 94, left hemisphere 92.3
1911 Female, age 85, right hemisphere 71.8
2148 Female, age 91, left hemisphere 71.2
1898 Male, age 80, left hemisphere 63.0
1855 Male, age 76, left hemisphere 58.5
Dentate gyrus
nTPM: 66.8
2530 Female, age 94, left hemisphere 78.0
2528 Male, age 74, both hemispheres 73.4
2246 Female, age 85, both hemispheres 72.3
1927 Female, age 91, both hemispheres 69.4
2531 Female, age 67, both hemispheres 60.8
2010 Male, age 76, both hemispheres 46.9
Entorhinal gyrus
nTPM: 87.1
1938 Female, age 85, left hemisphere 100.2
1787 Male, age 76, left hemisphere 90.4
2613 Female, age 94, left hemisphere 88.7
2117 Female, age 91, right hemisphere 85.9
2686 Male, age 75, right hemisphere 83.1
2764 Male, age 80, right hemisphere 74.0
Hippocampus, CA1
nTPM: 71.6
2527 Male, age 74, both hemispheres 133.1
1873 Female, age 85, both hemispheres 65.6
2082 Female, age 91, right hemisphere 58.3
2749 Male, age 80, left hemisphere 50.5
2045 Male, age 76, both hemispheres 50.4
Hippocampus, CA2
nTPM: 68.7
2249 Male, age 74, both hemispheres 84.1
2437 Female, age 94, left hemisphere 83.7
2113 Female, age 91, right hemisphere 65.4
1963 Male, age 80, left hemisphere 61.4
1940 Female, age 85, left hemisphere 58.8
1892 Male, age 76, both hemispheres 58.6
Hippocampus, CA3
nTPM: 68.6
2436 Male, age 74, both hemispheres 115.1
2861 Female, age 67, both hemispheres 85.0
1891 Female, age 85, both hemispheres 69.4
1867 Male, age 76, both hemispheres 52.1
2620 Female, age 94, left hemisphere 48.9
2137 Male, age 80, left hemisphere 41.3
Parahippocampal cortex
nTPM: 84.1
2692 Male, age 74, both hemispheres 124.0
1933 Female, age 85, both hemispheres 94.9
2622 Female, age 67, right hemisphere 89.9
2250 Female, age 67, right hemisphere 89.6
2245 Female, age 91, both hemispheres 79.8
2693 Female, age 94, both hemispheres 76.6
1990 Female, age 91, right hemisphere 74.1
1850 Male, age 80, both hemispheres 72.2
2532 Female, age 72, left hemisphere 71.4
2018 Male, age 76, both hemispheres 68.2
Perirhinal gyrus
nTPM: 79.9
1847 Female, age 91, left hemisphere 84.0
1794 Male, age 80, right hemisphere 83.5
1841 Female, age 85, right hemisphere 79.2
2521 Female, age 94, right hemisphere 76.4
2848 Male, age 76, right hemisphere 76.4
Subiculum
nTPM: 78.6
2619 Male, age 74, both hemispheres 125.9
2438 Female, age 94, left hemisphere 95.8
1977 Female, age 85, both hemispheres 77.9
2729 Female, age 91, right hemisphere 76.2
1901 Male, age 80, both hemispheres 50.5
2042 Male, age 76, both hemispheres 45.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.6
Samples: 197

Max nTPM: 195.2
Min nTPM: 15.6
Std nTPM: 32.6
Median nTPM: 70.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 195.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 193.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 185.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 176.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 161.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 144.3
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 140.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 134.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 132.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 129.7
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 125.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.7
FF:10153-102I9 76 years, female 46.5
FF:10169-103B7 60 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 153.6
Pig sample Sample description nTPM
Subiculum
nTPM: 153.7
Samples: 4

Max nTPM: 203.3
Min nTPM: 134.3
Sample A Female 203.3
Sample B Female 141.0
Sample C Male 136.0
Sample D Male 134.3
Dorsal hippocampus
nTPM: 121.0
Samples: 4

Max nTPM: 143.3
Min nTPM: 96.0
Sample A Female 143.1
Sample B Female 101.7
Sample C Male 143.3
Sample D Male 96.0
Entorhinal cortex
nTPM: 147.5
Samples: 4

Max nTPM: 178.0
Min nTPM: 122.9
Sample A Female 146.4
Sample B Female 142.5
Sample C Male 178.0
Sample D Male 122.9
Ventral hippocampus
nTPM: 122.4
Samples: 4

Max nTPM: 147.5
Min nTPM: 104.2
Sample A Female 115.4
Sample B Female 104.2
Sample C Male 147.5
Sample D Male 122.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 266.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 266.5
Samples: 4

Max nTPM: 285.7
Min nTPM: 238.5
Sample A Male 274.7
Sample B Male 267.2
Sample C Female 238.5
Sample D Female 285.7
Hippocampal formation
nTPM: 168.4
Samples: 4

Max nTPM: 215.6
Min nTPM: 125.3
Sample A Male 215.6
Sample B Male 164.0
Sample C Female 125.3
Sample D Female 168.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
70528557 Antisense, RP_050623_02_H02, Mouse strain C57BL/6J (56 days, male) 11.8
73931385 Antisense, RP_051214_04_D12, Mouse strain C57BL/6J (56 days, male) 9.6

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