HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:66.5 nTPM
HPA Brain:25.5 nTPM
GTEx:66.5 nTPM
FANTOM5:108.7 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:73.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034829Antibody HPA034830
Glial cells LowNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.5
Sample id Sample description nTPM
Hippocampus
nTPM: 24.3
1898 Male, age 80, left hemisphere 29.1
1911 Female, age 85, right hemisphere 26.8
1855 Male, age 76, left hemisphere 26.0
2529 Female, age 94, left hemisphere 25.6
2621 Female, age 67, right hemisphere 20.4
2148 Female, age 91, left hemisphere 18.2
Dentate gyrus
nTPM: 21.4
2010 Male, age 76, both hemispheres 27.0
2246 Female, age 85, both hemispheres 23.6
1927 Female, age 91, both hemispheres 22.1
2530 Female, age 94, left hemisphere 20.5
2528 Male, age 74, both hemispheres 19.3
2531 Female, age 67, both hemispheres 15.9
Entorhinal gyrus
nTPM: 18.8
2117 Female, age 91, right hemisphere 25.1
1938 Female, age 85, left hemisphere 22.9
1787 Male, age 76, left hemisphere 21.0
2764 Male, age 80, right hemisphere 18.5
2686 Male, age 75, right hemisphere 14.2
2613 Female, age 94, left hemisphere 11.2
Hippocampus, CA1
nTPM: 25.5
1873 Female, age 85, both hemispheres 28.9
2527 Male, age 74, both hemispheres 28.9
2749 Male, age 80, left hemisphere 25.2
2045 Male, age 76, both hemispheres 24.1
2082 Female, age 91, right hemisphere 20.7
Hippocampus, CA2
nTPM: 24.2
2249 Male, age 74, both hemispheres 33.1
1892 Male, age 76, both hemispheres 26.9
1940 Female, age 85, left hemisphere 23.8
2437 Female, age 94, left hemisphere 21.7
1963 Male, age 80, left hemisphere 21.4
2113 Female, age 91, right hemisphere 18.5
Hippocampus, CA3
nTPM: 22.0
2436 Male, age 74, both hemispheres 28.4
1891 Female, age 85, both hemispheres 28.1
1867 Male, age 76, both hemispheres 25.8
2137 Male, age 80, left hemisphere 22.2
2620 Female, age 94, left hemisphere 14.1
2861 Female, age 67, both hemispheres 13.3
Parahippocampal cortex
nTPM: 20.8
2250 Female, age 67, right hemisphere 25.8
1850 Male, age 80, both hemispheres 25.7
1933 Female, age 85, both hemispheres 23.3
2018 Male, age 76, both hemispheres 23.3
2245 Female, age 91, both hemispheres 22.7
1990 Female, age 91, right hemisphere 21.4
2532 Female, age 72, left hemisphere 19.9
2693 Female, age 94, both hemispheres 17.3
2692 Male, age 74, both hemispheres 16.2
2622 Female, age 67, right hemisphere 12.9
Perirhinal gyrus
nTPM: 22.3
1841 Female, age 85, right hemisphere 25.8
2521 Female, age 94, right hemisphere 23.8
1847 Female, age 91, left hemisphere 23.5
2848 Male, age 76, right hemisphere 19.8
1794 Male, age 80, right hemisphere 18.6
Subiculum
nTPM: 21.3
2042 Male, age 76, both hemispheres 25.4
1901 Male, age 80, both hemispheres 24.0
1977 Female, age 85, both hemispheres 23.7
2619 Male, age 74, both hemispheres 18.9
2729 Female, age 91, right hemisphere 18.8
2438 Female, age 94, left hemisphere 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.5
Samples: 197

Max nTPM: 140.3
Min nTPM: 39.8
Std nTPM: 14.8
Median nTPM: 65.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 140.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 135.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 128.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 106.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 98.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 97.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 94.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 92.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 92.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 91.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 90.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.7
FF:10169-103B7 60 years, female 127.7
FF:10153-102I9 76 years, female 89.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.4
Sample A Female 18.6
Sample B Female 20.2
Sample C Male 17.4
Sample D Male 18.4
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 24.9
Min nTPM: 20.1
Sample A Female 22.5
Sample B Female 24.9
Sample C Male 20.1
Sample D Male 20.6
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 25.0
Min nTPM: 17.0
Sample A Female 17.4
Sample B Female 25.0
Sample C Male 18.0
Sample D Male 17.0
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.3
Sample A Female 19.8
Sample B Female 22.0
Sample C Male 17.3
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.9
Samples: 4

Max nTPM: 77.1
Min nTPM: 62.5
Sample A Male 65.9
Sample B Male 70.0
Sample C Female 77.1
Sample D Female 62.5
Hippocampal formation
nTPM: 73.2
Samples: 4

Max nTPM: 83.5
Min nTPM: 66.0
Sample A Male 83.5
Sample B Male 66.0
Sample C Female 71.3
Sample D Female 72.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68342153 Antisense, RP_041207_02_H06, Mouse strain C57BL/6J (56 days, male) 1.1

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