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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
218.9
nTPM
FANTOM5:
93.9
Scaled Tags Per Million
Pig:
35.8
nTPM
Allen mouse:
3.7
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
218.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 166.0
2301
Female, age 85, both hemispheres
178.7
1984
Male, age 76, both hemispheres
170.3
2188
Female, age 91, both hemispheres
166.9
2090
Male, age 80, both hemispheres
148.1
Dorsal cochlear nucleus nTPM: 159.6
2187
Female, age 91, both hemispheres
173.1
2802
Male, age 74, right hemisphere
171.0
2370
Male, age 61, both hemispheres
154.3
2058
Male, age 76, both hemispheres
153.7
2378
Male, age 80, both hemispheres
145.7
Dorsal tegmental nucleus nTPM: 149.2
2083
Male, age 80, both hemispheres
179.8
1936
Male, age 76, left hemisphere
174.5
2326
Male, age 74, both hemispheres
147.2
2358
Male, age 61, both hemispheres
95.5
Dorsolateral tegmental area nTPM: 145.2
2654
Male, age 80, both hemispheres
169.9
2360
Male, age 74, both hemispheres
157.8
2141
Male, age 76, both hemispheres
153.4
2751
Female, age 85, both hemispheres
151.6
2337
Male, age 61, both hemispheres
93.2
Kolliker-Fuse nucleus nTPM: 181.1
2793
Female, age 91, left hemisphere
198.2
2315
Male, age 76, right hemisphere
173.3
2163
Male, age 80, both hemispheres
171.8
Lateral lemniscal nuclei nTPM: 194.4
2320
Female, age 91, left hemisphere
222.4
2453
Male, age 74, right hemisphere
200.9
2169
Male, age 76, both hemispheres
198.4
2746
Female, age 85, left hemisphere
194.1
2036
Male, age 80, both hemispheres
156.1
Lateral parabrachial nucleus nTPM: 159.7
2139
Female, age 85, right hemisphere
196.3
2013
Male, age 80, both hemispheres
156.0
2790
Male, age 61, both hemispheres
145.4
2792
Male, age 76, both hemispheres
141.4
Lateral vestibular nucleus nTPM: 201.0
2184
Male, age 76, both hemispheres
222.0
2311
Male, age 80, both hemispheres
180.0
Locus coeruleus nTPM: 166.1
2014
Male, age 55, unknown
190.0
2123
Female, age 91, both hemispheres
183.7
1980
Male, age 76, both hemispheres
177.8
2317
Female, age 72, unknown
177.8
2162
Male, age 80, both hemispheres
164.8
2720
Male, age 74, both hemispheres
135.7
2788
Male, age 74, unknown
132.9
Medial parabrachial nucleus nTPM: 174.6
2156
Male, age 61, both hemispheres
191.0
2786
Male, age 76, both hemispheres
183.9
2170
Female, age 91, both hemispheres
179.4
2463
Female, age 85, right hemisphere
178.7
2854
Male, age 80, both hemispheres
140.1
Medial periolivary nuclei nTPM: 191.9
2063
Male, age 76, both hemispheres
227.4
2171
Female, age 85, both hemispheres
213.0
2458
Female, age 91, both hemispheres
176.2
2081
Male, age 80, both hemispheres
175.6
2791
Male, age 74, right hemisphere
167.4
Motor facial nucleus nTPM: 195.5
2795
Female, age 91, both hemispheres
241.9
2062
Male, age 76, both hemispheres
232.9
2327
Male, age 80, both hemispheres
190.5
2126
Male, age 61, both hemispheres
182.1
2365
Male, age 74, right hemisphere
164.9
2697
Female, age 85, both hemispheres
160.6
Motor trigeminal nucleus nTPM: 185.4
2560
Male, age 74, both hemispheres
200.4
2079
Male, age 80, both hemispheres
185.8
2309
Male, age 76, both hemispheres
184.8
2335
Male, age 61, both hemispheres
183.1
2321
Female, age 91, both hemispheres
173.0
Nuclei of the trapezoid body nTPM: 218.9
2735
Female, age 85, both hemispheres
238.4
2159
Male, age 61, both hemispheres
236.8
2368
Female, age 91, both hemispheres
225.0
1983
Male, age 76, both hemispheres
210.9
2166
Male, age 80, both hemispheres
183.4
Nucleus raphe magnus nTPM: 206.7
2160
Male, age 61, both hemispheres
244.3
2051
Male, age 76, both hemispheres
213.7
2455
Male, age 74, both hemispheres
208.5
2172
Female, age 85, both hemispheres
204.0
2328
Male, age 80, both hemispheres
194.7
2459
Female, age 91, both hemispheres
174.7
Paramedian reticular nucleus nTPM: 163.6
2313
Male, age 61, both hemispheres
203.6
2057
Male, age 80, both hemispheres
177.6
2050
Female, age 85, both hemispheres
152.2
2052
Male, age 76, both hemispheres
121.1
Pedunculopontine tegmental nucleus nTPM: 134.7
1921
Female, age 85, both hemispheres
170.4
2334
Male, age 80, both hemispheres
144.2
2338
Male, age 61, both hemispheres
89.5
Pontine nuclei nTPM: 209.5
1968
Male, age 76, left hemisphere
263.1
2787
Female, age 85, both hemispheres
246.0
1863
Male, age 55, unknown
232.7
2727
Male, age 61, right hemisphere
231.4
2109
Female, age 72, unknown
199.0
2115
Male, age 80, left hemisphere
193.8
2319
Female, age 91, both hemispheres
168.0
2454
Male, age 74, left hemisphere
141.6
Pontine raphe nucleus nTPM: 168.0
2122
Female, age 85, midline
174.0
2853
Male, age 76, midline
162.0
Posteroventral cochlear nucleus nTPM: 150.6
2070
Male, age 76, both hemispheres
170.9
2752
Female, age 85, both hemispheres
160.8
2341
Male, age 80, both hemispheres
141.1
2135
Female, age 91, both hemispheres
140.6
2371
Male, age 61, both hemispheres
139.7
Principal sensory trigeminal nucleus nTPM: 197.0
2158
Male, age 61, both hemispheres
245.5
2324
Male, age 76, both hemispheres
202.4
2008
Male, age 80, left hemisphere
180.7
2367
Female, age 91, left hemisphere
159.6
Reticular pontine nucleus, caudal nTPM: 194.5
2332
Male, age 80, right hemisphere
217.1
2457
Female, age 91, both hemispheres
211.9
2092
Male, age 76, both hemispheres
200.8
2559
Male, age 74, both hemispheres
148.3
Reticular pontine nucleus, oral nTPM: 167.6
2366
Female, age 91, both hemispheres
203.3
2167
Male, age 76, both hemispheres
171.7
2012
Female, age 85, both hemispheres
165.6
1939
Male, age 80, both hemispheres
153.3
2361
Male, age 74, both hemispheres
144.1
Reticulotegmental nucleus nTPM: 173.9
2322
Female, age 91, both hemispheres
182.4
2325
Male, age 76, both hemispheres
178.4
2333
Male, age 80, both hemispheres
174.1
2452
Male, age 74, both hemispheres
160.6
Spinal trigeminal nucleus, oral nTPM: 173.7
2164
Male, age 80, both hemispheres
179.4
1978
Male, age 76, both hemispheres
177.6
2737
Female, age 85, both hemispheres
164.0
Subcoeruleus area nTPM: 166.5
2089
Male, age 76, left hemisphere
214.4
2323
Female, age 91, left hemisphere
160.5
1958
Male, age 80, both hemispheres
160.0
2451
Male, age 74, both hemispheres
153.4
2369
Female, age 85, left hemisphere
144.3
Superior olive nTPM: 190.6
2020
Male, age 76, both hemispheres
206.4
2561
Female, age 91, both hemispheres
205.4
2329
Male, age 80, right hemisphere
192.8
1875
Female, age 85, both hemispheres
184.3
2364
Male, age 74, right hemisphere
164.2
Ventral periolivary nuclei nTPM: 194.4
2165
Male, age 80, both hemispheres
205.8
2130
Female, age 85, both hemispheres
193.9
2794
Female, age 91, left hemisphere
193.7
2023
Male, age 76, both hemispheres
184.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 174.3
1959
Male, age 76, both hemispheres
206.9
2456
Female, age 91, both hemispheres
196.4
2449
Male, age 74, both hemispheres
193.2
2161
Male, age 80, both hemispheres
182.9
2840
Female, age 85, both hemispheres
143.2
2359
Male, age 61, both hemispheres
123.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
35.8
Pig sample
Sample description
nTPM
Pons nTPM: 35.8
Samples: 4
Max nTPM: 42.2
Min nTPM: 29.7
Sample A
Female
42.2
Sample B
Female
29.7
Sample C
Male
32.0
Sample D
Male
39.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
