HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:126.8 nTPM
HPA Brain:528.4 nTPM
GTEx:126.8 nTPM
FANTOM5:808.9 Scaled Tags Per Million
Pig:388.5 nTPM
Mouse:238.2 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012685Antibody HPA013149
Glial cells MediumNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 528.4
Sample id Sample description nTPM
Hippocampus
nTPM: 509.6
2529 Female, age 94, left hemisphere 588.1
1898 Male, age 80, left hemisphere 540.3
2148 Female, age 91, left hemisphere 526.2
2621 Female, age 67, right hemisphere 481.8
1911 Female, age 85, right hemisphere 471.2
1855 Male, age 76, left hemisphere 449.7
Dentate gyrus
nTPM: 474.9
2530 Female, age 94, left hemisphere 557.8
1927 Female, age 91, both hemispheres 481.1
2531 Female, age 67, both hemispheres 471.9
2010 Male, age 76, both hemispheres 456.5
2528 Male, age 74, both hemispheres 441.3
2246 Female, age 85, both hemispheres 440.8
Entorhinal gyrus
nTPM: 528.4
2686 Male, age 75, right hemisphere 599.4
2117 Female, age 91, right hemisphere 572.1
2764 Male, age 80, right hemisphere 534.1
1938 Female, age 85, left hemisphere 500.7
1787 Male, age 76, left hemisphere 486.8
2613 Female, age 94, left hemisphere 477.2
Hippocampus, CA1
nTPM: 503.4
2749 Male, age 80, left hemisphere 610.8
2527 Male, age 74, both hemispheres 522.8
1873 Female, age 85, both hemispheres 497.1
2082 Female, age 91, right hemisphere 457.0
2045 Male, age 76, both hemispheres 429.1
Hippocampus, CA2
nTPM: 484.5
1963 Male, age 80, left hemisphere 617.8
2113 Female, age 91, right hemisphere 508.7
1892 Male, age 76, both hemispheres 483.5
2437 Female, age 94, left hemisphere 466.7
1940 Female, age 85, left hemisphere 429.3
2249 Male, age 74, both hemispheres 401.2
Hippocampus, CA3
nTPM: 465.0
2137 Male, age 80, left hemisphere 540.2
2861 Female, age 67, both hemispheres 491.8
1891 Female, age 85, both hemispheres 487.1
1867 Male, age 76, both hemispheres 435.7
2620 Female, age 94, left hemisphere 424.8
2436 Male, age 74, both hemispheres 410.4
Parahippocampal cortex
nTPM: 478.2
1850 Male, age 80, both hemispheres 558.6
2245 Female, age 91, both hemispheres 538.7
2692 Male, age 74, both hemispheres 527.6
1990 Female, age 91, right hemisphere 491.8
2622 Female, age 67, right hemisphere 488.7
2018 Male, age 76, both hemispheres 488.1
1933 Female, age 85, both hemispheres 484.8
2532 Female, age 72, left hemisphere 461.3
2250 Female, age 67, right hemisphere 378.7
2693 Female, age 94, both hemispheres 363.4
Perirhinal gyrus
nTPM: 502.6
1847 Female, age 91, left hemisphere 600.4
1794 Male, age 80, right hemisphere 555.4
1841 Female, age 85, right hemisphere 495.2
2848 Male, age 76, right hemisphere 480.6
2521 Female, age 94, right hemisphere 381.6
Subiculum
nTPM: 499.8
2438 Female, age 94, left hemisphere 564.0
1901 Male, age 80, both hemispheres 515.0
2619 Male, age 74, both hemispheres 502.9
1977 Female, age 85, both hemispheres 495.8
2729 Female, age 91, right hemisphere 495.6
2042 Male, age 76, both hemispheres 425.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 126.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.8
Samples: 197

Max nTPM: 308.6
Min nTPM: 32.1
Std nTPM: 49.8
Median nTPM: 123.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 308.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 258.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 256.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 247.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 245.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 244.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 237.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 234.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 233.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 227.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 222.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 808.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 808.9
FF:10169-103B7 60 years, female 809.0
FF:10153-102I9 76 years, female 808.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 388.5
Pig sample Sample description nTPM
Subiculum
nTPM: 350.8
Samples: 4

Max nTPM: 463.6
Min nTPM: 302.7
Sample A Female 463.6
Sample B Female 305.8
Sample C Male 330.9
Sample D Male 302.7
Dorsal hippocampus
nTPM: 370.6
Samples: 4

Max nTPM: 433.4
Min nTPM: 294.1
Sample A Female 433.4
Sample B Female 371.3
Sample C Male 383.4
Sample D Male 294.1
Entorhinal cortex
nTPM: 388.5
Samples: 4

Max nTPM: 421.6
Min nTPM: 357.3
Sample A Female 421.6
Sample B Female 374.9
Sample C Male 400.3
Sample D Male 357.3
Ventral hippocampus
nTPM: 348.2
Samples: 4

Max nTPM: 432.3
Min nTPM: 270.9
Sample A Female 297.1
Sample B Female 270.9
Sample C Male 392.3
Sample D Male 432.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 238.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 238.2
Samples: 4

Max nTPM: 292.8
Min nTPM: 211.9
Sample A Male 226.2
Sample B Male 211.9
Sample C Female 222.0
Sample D Female 292.8
Hippocampal formation
nTPM: 199.5
Samples: 4

Max nTPM: 232.4
Min nTPM: 173.2
Sample A Male 178.5
Sample B Male 214.0
Sample C Female 232.4
Sample D Female 173.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
69885696 Antisense, RP_050512_03_C05, Mouse strain C57BL/6J (56 days, male) 6.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org