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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
470.2
nTPM
FANTOM5:
790.5
Scaled Tags Per Million
Pig:
286.7
nTPM
Allen mouse:
1.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
470.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 375.7
2090
Male, age 80, both hemispheres
395.7
2188
Female, age 91, both hemispheres
393.0
1984
Male, age 76, both hemispheres
360.5
2301
Female, age 85, both hemispheres
353.5
Dorsal cochlear nucleus nTPM: 458.4
2802
Male, age 74, right hemisphere
627.5
2378
Male, age 80, both hemispheres
436.2
2370
Male, age 61, both hemispheres
426.9
2058
Male, age 76, both hemispheres
414.7
2187
Female, age 91, both hemispheres
386.9
Dorsal tegmental nucleus nTPM: 423.9
2326
Male, age 74, both hemispheres
474.6
2083
Male, age 80, both hemispheres
444.5
2358
Male, age 61, both hemispheres
392.2
1936
Male, age 76, left hemisphere
384.4
Dorsolateral tegmental area nTPM: 389.0
2654
Male, age 80, both hemispheres
451.7
2337
Male, age 61, both hemispheres
385.3
2360
Male, age 74, both hemispheres
374.4
2141
Male, age 76, both hemispheres
371.7
2751
Female, age 85, both hemispheres
361.8
Kolliker-Fuse nucleus nTPM: 431.3
2163
Male, age 80, both hemispheres
472.6
2315
Male, age 76, right hemisphere
436.9
2793
Female, age 91, left hemisphere
384.6
Lateral lemniscal nuclei nTPM: 385.1
2169
Male, age 76, both hemispheres
509.5
2746
Female, age 85, left hemisphere
376.5
2036
Male, age 80, both hemispheres
372.5
2453
Male, age 74, right hemisphere
339.2
2320
Female, age 91, left hemisphere
328.1
Lateral parabrachial nucleus nTPM: 427.8
2139
Female, age 85, right hemisphere
480.3
2790
Male, age 61, both hemispheres
445.0
2013
Male, age 80, both hemispheres
408.6
2792
Male, age 76, both hemispheres
377.4
Lateral vestibular nucleus nTPM: 444.8
2184
Male, age 76, both hemispheres
475.1
2311
Male, age 80, both hemispheres
414.6
Locus coeruleus nTPM: 470.2
2720
Male, age 74, both hemispheres
514.4
2014
Male, age 55, unknown
508.8
2123
Female, age 91, both hemispheres
475.1
2788
Male, age 74, unknown
473.4
2317
Female, age 72, unknown
445.8
1980
Male, age 76, both hemispheres
438.5
2162
Male, age 80, both hemispheres
435.8
Medial parabrachial nucleus nTPM: 403.9
2156
Male, age 61, both hemispheres
465.7
2854
Male, age 80, both hemispheres
413.1
2786
Male, age 76, both hemispheres
394.9
2170
Female, age 91, both hemispheres
386.9
2463
Female, age 85, right hemisphere
358.9
Medial periolivary nuclei nTPM: 387.3
2063
Male, age 76, both hemispheres
480.2
2171
Female, age 85, both hemispheres
422.7
2081
Male, age 80, both hemispheres
377.0
2791
Male, age 74, right hemisphere
331.1
2458
Female, age 91, both hemispheres
325.2
Motor facial nucleus nTPM: 406.4
2062
Male, age 76, both hemispheres
502.0
2795
Female, age 91, both hemispheres
437.7
2697
Female, age 85, both hemispheres
400.2
2126
Male, age 61, both hemispheres
395.6
2327
Male, age 80, both hemispheres
378.3
2365
Male, age 74, right hemisphere
324.3
Motor trigeminal nucleus nTPM: 374.8
2309
Male, age 76, both hemispheres
398.1
2335
Male, age 61, both hemispheres
392.9
2079
Male, age 80, both hemispheres
383.4
2321
Female, age 91, both hemispheres
352.1
2560
Male, age 74, both hemispheres
347.7
Nuclei of the trapezoid body nTPM: 415.4
1983
Male, age 76, both hemispheres
454.3
2159
Male, age 61, both hemispheres
446.1
2166
Male, age 80, both hemispheres
422.0
2735
Female, age 85, both hemispheres
406.4
2368
Female, age 91, both hemispheres
348.0
Nucleus raphe magnus nTPM: 393.6
2051
Male, age 76, both hemispheres
426.6
2172
Female, age 85, both hemispheres
425.5
2328
Male, age 80, both hemispheres
416.2
2160
Male, age 61, both hemispheres
402.4
2455
Male, age 74, both hemispheres
358.8
2459
Female, age 91, both hemispheres
332.1
Paramedian reticular nucleus nTPM: 407.9
2050
Female, age 85, both hemispheres
431.7
2057
Male, age 80, both hemispheres
425.6
2313
Male, age 61, both hemispheres
404.1
2052
Male, age 76, both hemispheres
370.1
Pedunculopontine tegmental nucleus nTPM: 400.1
2334
Male, age 80, both hemispheres
423.2
1921
Female, age 85, both hemispheres
392.4
2338
Male, age 61, both hemispheres
384.7
Pontine nuclei nTPM: 412.9
1863
Male, age 55, unknown
544.1
2787
Female, age 85, both hemispheres
478.3
1968
Male, age 76, left hemisphere
445.9
2109
Female, age 72, unknown
425.6
2115
Male, age 80, left hemisphere
387.2
2727
Male, age 61, right hemisphere
349.7
2319
Female, age 91, both hemispheres
347.7
2454
Male, age 74, left hemisphere
324.5
Pontine raphe nucleus nTPM: 403.0
2122
Female, age 85, midline
418.0
2853
Male, age 76, midline
388.0
Posteroventral cochlear nucleus nTPM: 398.6
2371
Male, age 61, both hemispheres
447.0
2752
Female, age 85, both hemispheres
395.0
2070
Male, age 76, both hemispheres
389.1
2341
Male, age 80, both hemispheres
386.7
2135
Female, age 91, both hemispheres
375.2
Principal sensory trigeminal nucleus nTPM: 398.7
2324
Male, age 76, both hemispheres
447.1
2158
Male, age 61, both hemispheres
414.6
2008
Male, age 80, left hemisphere
411.7
2367
Female, age 91, left hemisphere
321.2
Reticular pontine nucleus, caudal nTPM: 398.4
2092
Male, age 76, both hemispheres
443.0
2559
Male, age 74, both hemispheres
403.0
2332
Male, age 80, right hemisphere
382.9
2457
Female, age 91, both hemispheres
364.7
Reticular pontine nucleus, oral nTPM: 381.6
2012
Female, age 85, both hemispheres
427.5
1939
Male, age 80, both hemispheres
425.8
2167
Male, age 76, both hemispheres
386.0
2366
Female, age 91, both hemispheres
367.8
2361
Male, age 74, both hemispheres
301.1
Reticulotegmental nucleus nTPM: 410.6
2452
Male, age 74, both hemispheres
445.5
2325
Male, age 76, both hemispheres
415.7
2322
Female, age 91, both hemispheres
392.1
2333
Male, age 80, both hemispheres
389.0
Spinal trigeminal nucleus, oral nTPM: 392.7
2164
Male, age 80, both hemispheres
440.5
1978
Male, age 76, both hemispheres
380.9
2737
Female, age 85, both hemispheres
356.6
Subcoeruleus area nTPM: 424.2
2451
Male, age 74, both hemispheres
514.3
2089
Male, age 76, left hemisphere
422.0
1958
Male, age 80, both hemispheres
414.7
2323
Female, age 91, left hemisphere
393.0
2369
Female, age 85, left hemisphere
377.0
Superior olive nTPM: 389.1
2020
Male, age 76, both hemispheres
437.3
1875
Female, age 85, both hemispheres
428.9
2329
Male, age 80, right hemisphere
390.6
2561
Female, age 91, both hemispheres
363.6
2364
Male, age 74, right hemisphere
325.2
Ventral periolivary nuclei nTPM: 405.7
2165
Male, age 80, both hemispheres
437.9
2130
Female, age 85, both hemispheres
430.9
2023
Male, age 76, both hemispheres
416.3
2794
Female, age 91, left hemisphere
337.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 388.7
1959
Male, age 76, both hemispheres
435.8
2359
Male, age 61, both hemispheres
414.1
2840
Female, age 85, both hemispheres
404.9
2161
Male, age 80, both hemispheres
399.7
2449
Male, age 74, both hemispheres
342.3
2456
Female, age 91, both hemispheres
335.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
286.7
Pig sample
Sample description
nTPM
Pons nTPM: 286.8
Samples: 4
Max nTPM: 393.0
Min nTPM: 210.8
Sample A
Female
393.0
Sample B
Female
210.8
Sample C
Male
248.6
Sample D
Male
294.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
