HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.7 nTPM
HPA Brain:17.0 nTPM
GTEx:13.7 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:16.2 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.4
1911 Female, age 85, right hemisphere 16.1
1898 Male, age 80, left hemisphere 14.9
2148 Female, age 91, left hemisphere 14.0
1855 Male, age 76, left hemisphere 12.0
2529 Female, age 94, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.7
Dentate gyrus
nTPM: 12.2
1927 Female, age 91, both hemispheres 15.8
2246 Female, age 85, both hemispheres 14.5
2010 Male, age 76, both hemispheres 12.7
2531 Female, age 67, both hemispheres 10.8
2530 Female, age 94, left hemisphere 9.8
2528 Male, age 74, both hemispheres 9.5
Entorhinal gyrus
nTPM: 14.8
1787 Male, age 76, left hemisphere 18.3
2764 Male, age 80, right hemisphere 18.1
1938 Female, age 85, left hemisphere 17.3
2613 Female, age 94, left hemisphere 12.5
2117 Female, age 91, right hemisphere 12.3
2686 Male, age 75, right hemisphere 10.2
Hippocampus, CA1
nTPM: 13.4
2749 Male, age 80, left hemisphere 17.0
2527 Male, age 74, both hemispheres 13.9
2082 Female, age 91, right hemisphere 12.9
1873 Female, age 85, both hemispheres 12.1
2045 Male, age 76, both hemispheres 11.1
Hippocampus, CA2
nTPM: 14.3
1892 Male, age 76, both hemispheres 16.9
2249 Male, age 74, both hemispheres 16.2
2437 Female, age 94, left hemisphere 14.6
1963 Male, age 80, left hemisphere 13.7
1940 Female, age 85, left hemisphere 13.5
2113 Female, age 91, right hemisphere 10.7
Hippocampus, CA3
nTPM: 14.3
2436 Male, age 74, both hemispheres 17.7
1891 Female, age 85, both hemispheres 17.2
1867 Male, age 76, both hemispheres 14.4
2861 Female, age 67, both hemispheres 14.1
2137 Male, age 80, left hemisphere 12.2
2620 Female, age 94, left hemisphere 9.9
Parahippocampal cortex
nTPM: 17.0
2692 Male, age 74, both hemispheres 19.6
1850 Male, age 80, both hemispheres 19.1
1990 Female, age 91, right hemisphere 18.5
2245 Female, age 91, both hemispheres 18.1
2693 Female, age 94, both hemispheres 17.2
2018 Male, age 76, both hemispheres 16.8
2532 Female, age 72, left hemisphere 16.6
2250 Female, age 67, right hemisphere 16.4
1933 Female, age 85, both hemispheres 15.3
2622 Female, age 67, right hemisphere 12.6
Perirhinal gyrus
nTPM: 16.6
1794 Male, age 80, right hemisphere 18.3
1847 Female, age 91, left hemisphere 17.9
1841 Female, age 85, right hemisphere 16.8
2848 Male, age 76, right hemisphere 16.3
2521 Female, age 94, right hemisphere 13.5
Subiculum
nTPM: 15.9
1977 Female, age 85, both hemispheres 17.8
1901 Male, age 80, both hemispheres 16.9
2619 Male, age 74, both hemispheres 16.7
2438 Female, age 94, left hemisphere 16.3
2042 Male, age 76, both hemispheres 16.1
2729 Female, age 91, right hemisphere 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 24.7
Min nTPM: 8.9
Std nTPM: 2.5
Median nTPM: 13.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 23.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 19.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 19.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 19.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 19.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.4
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 18.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 12.1
Min nTPM: 10.0
Sample A Female 12.1
Sample B Female 10.9
Sample C Male 10.8
Sample D Male 10.0
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.0
Sample A Female 12.0
Sample B Female 10.3
Sample C Male 10.8
Sample D Male 9.0
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.2
Sample A Female 9.7
Sample B Female 11.9
Sample C Male 11.1
Sample D Male 8.2
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.2
Sample A Female 11.8
Sample B Female 11.0
Sample C Male 9.2
Sample D Male 9.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 17.1
Min nTPM: 15.0
Sample A Male 15.8
Sample B Male 16.8
Sample C Female 17.1
Sample D Female 15.0
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 18.4
Min nTPM: 13.7
Sample A Male 18.4
Sample B Male 16.7
Sample C Female 13.7
Sample D Female 15.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69202687 Antisense, RP_050324_04_B09, Mouse strain C57BL/6J (56 days, male) 3.9

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