HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:89.1 nTPM
HPA Brain:90.0 nTPM
GTEx:89.1 nTPM
FANTOM5:155.4 Scaled Tags Per Million
Pig:94.0 nTPM
Mouse:59.3 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050275
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.0
Sample id Sample description nTPM
Hippocampus
nTPM: 85.5
1911 Female, age 85, right hemisphere 94.7
2621 Female, age 67, right hemisphere 86.2
1855 Male, age 76, left hemisphere 84.7
1898 Male, age 80, left hemisphere 83.4
2529 Female, age 94, left hemisphere 82.7
2148 Female, age 91, left hemisphere 81.2
Dentate gyrus
nTPM: 85.6
2010 Male, age 76, both hemispheres 101.2
2528 Male, age 74, both hemispheres 88.2
2246 Female, age 85, both hemispheres 87.3
2531 Female, age 67, both hemispheres 80.0
1927 Female, age 91, both hemispheres 79.8
2530 Female, age 94, left hemisphere 77.2
Entorhinal gyrus
nTPM: 80.6
2117 Female, age 91, right hemisphere 89.6
1938 Female, age 85, left hemisphere 87.9
1787 Male, age 76, left hemisphere 84.6
2764 Male, age 80, right hemisphere 79.5
2686 Male, age 75, right hemisphere 73.5
2613 Female, age 94, left hemisphere 68.8
Hippocampus, CA1
nTPM: 86.3
1873 Female, age 85, both hemispheres 92.7
2045 Male, age 76, both hemispheres 88.3
2527 Male, age 74, both hemispheres 87.4
2749 Male, age 80, left hemisphere 85.8
2082 Female, age 91, right hemisphere 77.5
Hippocampus, CA2
nTPM: 86.5
2249 Male, age 74, both hemispheres 93.4
1892 Male, age 76, both hemispheres 91.4
1940 Female, age 85, left hemisphere 90.9
2113 Female, age 91, right hemisphere 83.7
1963 Male, age 80, left hemisphere 81.3
2437 Female, age 94, left hemisphere 78.5
Hippocampus, CA3
nTPM: 85.7
2436 Male, age 74, both hemispheres 103.2
1891 Female, age 85, both hemispheres 100.8
1867 Male, age 76, both hemispheres 97.4
2137 Male, age 80, left hemisphere 84.4
2861 Female, age 67, both hemispheres 66.6
2620 Female, age 94, left hemisphere 61.6
Parahippocampal cortex
nTPM: 85.0
2018 Male, age 76, both hemispheres 99.0
1933 Female, age 85, both hemispheres 91.3
1850 Male, age 80, both hemispheres 91.0
2693 Female, age 94, both hemispheres 85.9
2250 Female, age 67, right hemisphere 85.2
2532 Female, age 72, left hemisphere 84.3
1990 Female, age 91, right hemisphere 82.6
2692 Male, age 74, both hemispheres 80.1
2245 Female, age 91, both hemispheres 76.9
2622 Female, age 67, right hemisphere 73.1
Perirhinal gyrus
nTPM: 88.1
1841 Female, age 85, right hemisphere 97.0
2521 Female, age 94, right hemisphere 95.0
1794 Male, age 80, right hemisphere 85.2
2848 Male, age 76, right hemisphere 83.0
1847 Female, age 91, left hemisphere 80.2
Subiculum
nTPM: 90.0
2042 Male, age 76, both hemispheres 98.9
1901 Male, age 80, both hemispheres 94.6
1977 Female, age 85, both hemispheres 92.7
2438 Female, age 94, left hemisphere 87.3
2619 Male, age 74, both hemispheres 83.8
2729 Female, age 91, right hemisphere 82.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.1
Samples: 197

Max nTPM: 182.1
Min nTPM: 30.6
Std nTPM: 21.0
Median nTPM: 85.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 182.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 167.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 160.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 158.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 156.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 132.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 130.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 129.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 129.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 125.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 123.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 155.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 155.4
FF:10153-102I9 76 years, female 163.4
FF:10169-103B7 60 years, female 147.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.0
Pig sample Sample description nTPM
Subiculum
nTPM: 93.4
Samples: 4

Max nTPM: 96.2
Min nTPM: 91.7
Sample A Female 92.6
Sample B Female 91.7
Sample C Male 96.2
Sample D Male 92.9
Dorsal hippocampus
nTPM: 94.1
Samples: 4

Max nTPM: 102.8
Min nTPM: 83.0
Sample A Female 83.0
Sample B Female 92.0
Sample C Male 98.4
Sample D Male 102.8
Entorhinal cortex
nTPM: 92.2
Samples: 4

Max nTPM: 100.7
Min nTPM: 85.4
Sample A Female 85.4
Sample B Female 100.7
Sample C Male 92.3
Sample D Male 90.5
Ventral hippocampus
nTPM: 90.6
Samples: 4

Max nTPM: 99.8
Min nTPM: 80.4
Sample A Female 88.5
Sample B Female 99.8
Sample C Male 80.4
Sample D Male 93.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.6
Samples: 4

Max nTPM: 59.1
Min nTPM: 51.4
Sample A Male 55.1
Sample B Male 59.1
Sample C Female 56.7
Sample D Female 51.4
Hippocampal formation
nTPM: 59.3
Samples: 4

Max nTPM: 61.4
Min nTPM: 56.7
Sample A Male 60.5
Sample B Male 61.4
Sample C Female 58.5
Sample D Female 56.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69873612 Antisense, RP_050512_01_F03, Mouse strain C57BL/6J (56 days, male) 1.6

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