HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:29.7 nTPM
HPA Brain:39.3 nTPM
GTEx:29.7 nTPM
FANTOM5:50.9 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:109.8 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034708Antibody HPA040425
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
2529 Female, age 94, left hemisphere 37.5
1911 Female, age 85, right hemisphere 30.0
2148 Female, age 91, left hemisphere 28.4
2621 Female, age 67, right hemisphere 27.9
1855 Male, age 76, left hemisphere 27.6
1898 Male, age 80, left hemisphere 26.1
Dentate gyrus
nTPM: 31.1
2530 Female, age 94, left hemisphere 38.3
2246 Female, age 85, both hemispheres 33.8
2010 Male, age 76, both hemispheres 32.5
2528 Male, age 74, both hemispheres 29.9
1927 Female, age 91, both hemispheres 27.2
2531 Female, age 67, both hemispheres 24.8
Entorhinal gyrus
nTPM: 34.1
2764 Male, age 80, right hemisphere 42.5
2613 Female, age 94, left hemisphere 37.8
2686 Male, age 75, right hemisphere 36.4
2117 Female, age 91, right hemisphere 36.0
1938 Female, age 85, left hemisphere 27.1
1787 Male, age 76, left hemisphere 25.2
Hippocampus, CA1
nTPM: 27.8
2082 Female, age 91, right hemisphere 31.6
2749 Male, age 80, left hemisphere 31.2
1873 Female, age 85, both hemispheres 28.6
2527 Male, age 74, both hemispheres 27.9
2045 Male, age 76, both hemispheres 19.8
Hippocampus, CA2
nTPM: 31.4
2437 Female, age 94, left hemisphere 35.8
1940 Female, age 85, left hemisphere 34.1
2113 Female, age 91, right hemisphere 32.6
1963 Male, age 80, left hemisphere 32.1
2249 Male, age 74, both hemispheres 29.3
1892 Male, age 76, both hemispheres 24.4
Hippocampus, CA3
nTPM: 27.8
1891 Female, age 85, both hemispheres 40.8
1867 Male, age 76, both hemispheres 31.7
2137 Male, age 80, left hemisphere 29.7
2436 Male, age 74, both hemispheres 25.8
2620 Female, age 94, left hemisphere 25.6
2861 Female, age 67, both hemispheres 13.4
Parahippocampal cortex
nTPM: 29.5
2692 Male, age 74, both hemispheres 45.9
1990 Female, age 91, right hemisphere 34.5
2532 Female, age 72, left hemisphere 34.5
1850 Male, age 80, both hemispheres 31.2
2693 Female, age 94, both hemispheres 30.9
1933 Female, age 85, both hemispheres 26.5
2018 Male, age 76, both hemispheres 25.7
2245 Female, age 91, both hemispheres 25.6
2250 Female, age 67, right hemisphere 22.4
2622 Female, age 67, right hemisphere 17.6
Perirhinal gyrus
nTPM: 25.8
2521 Female, age 94, right hemisphere 30.3
1794 Male, age 80, right hemisphere 27.2
2848 Male, age 76, right hemisphere 26.9
1847 Female, age 91, left hemisphere 22.8
1841 Female, age 85, right hemisphere 21.9
Subiculum
nTPM: 39.3
2042 Male, age 76, both hemispheres 49.2
1901 Male, age 80, both hemispheres 45.6
2438 Female, age 94, left hemisphere 45.1
2619 Male, age 74, both hemispheres 33.3
1977 Female, age 85, both hemispheres 32.3
2729 Female, age 91, right hemisphere 30.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.7
Samples: 197

Max nTPM: 45.6
Min nTPM: 15.1
Std nTPM: 5.6
Median nTPM: 29.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 45.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 41.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 41.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 40.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 40.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 39.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 39.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.9
FF:10169-103B7 60 years, female 62.3
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.9
Pig sample Sample description nTPM
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 38.3
Min nTPM: 30.1
Sample A Female 38.3
Sample B Female 30.1
Sample C Male 30.9
Sample D Male 30.5
Dorsal hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 43.2
Min nTPM: 29.6
Sample A Female 43.2
Sample B Female 37.2
Sample C Male 33.7
Sample D Male 29.6
Entorhinal cortex
nTPM: 34.5
Samples: 4

Max nTPM: 36.2
Min nTPM: 32.2
Sample A Female 36.2
Sample B Female 35.7
Sample C Male 33.9
Sample D Male 32.2
Ventral hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 42.9
Min nTPM: 25.9
Sample A Female 37.0
Sample B Female 25.9
Sample C Male 32.8
Sample D Male 42.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.9
Samples: 4

Max nTPM: 132.7
Min nTPM: 91.2
Sample A Male 101.0
Sample B Male 114.5
Sample C Female 91.2
Sample D Female 132.7
Hippocampal formation
nTPM: 88.0
Samples: 4

Max nTPM: 95.9
Min nTPM: 81.4
Sample A Male 85.2
Sample B Male 89.4
Sample C Female 95.9
Sample D Female 81.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
69873785 Antisense, RP_050512_02_A01, Mouse strain C57BL/6J (56 days, male) 11.7

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