HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.2 nTPM
HPA Brain:30.1 nTPM
GTEx:16.2 nTPM
FANTOM5:10.4 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:33.8 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005922Antibody HPA006028Antibody CAB008368
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.1
Sample id Sample description nTPM
Hippocampus
nTPM: 19.7
2148 Female, age 91, left hemisphere 25.8
2621 Female, age 67, right hemisphere 23.8
1855 Male, age 76, left hemisphere 21.6
1898 Male, age 80, left hemisphere 20.3
1911 Female, age 85, right hemisphere 17.3
2529 Female, age 94, left hemisphere 9.3
Dentate gyrus
nTPM: 24.9
1927 Female, age 91, both hemispheres 36.8
2010 Male, age 76, both hemispheres 31.7
2531 Female, age 67, both hemispheres 28.5
2530 Female, age 94, left hemisphere 19.4
2246 Female, age 85, both hemispheres 18.4
2528 Male, age 74, both hemispheres 14.6
Entorhinal gyrus
nTPM: 15.8
2613 Female, age 94, left hemisphere 21.0
1938 Female, age 85, left hemisphere 18.8
1787 Male, age 76, left hemisphere 17.0
2764 Male, age 80, right hemisphere 15.7
2686 Male, age 75, right hemisphere 13.5
2117 Female, age 91, right hemisphere 9.0
Hippocampus, CA1
nTPM: 30.1
2749 Male, age 80, left hemisphere 55.2
2045 Male, age 76, both hemispheres 40.3
1873 Female, age 85, both hemispheres 34.7
2527 Male, age 74, both hemispheres 12.5
2082 Female, age 91, right hemisphere 8.0
Hippocampus, CA2
nTPM: 20.3
1963 Male, age 80, left hemisphere 40.1
1892 Male, age 76, both hemispheres 32.2
1940 Female, age 85, left hemisphere 16.8
2437 Female, age 94, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.2
2113 Female, age 91, right hemisphere 9.1
Hippocampus, CA3
nTPM: 22.7
1867 Male, age 76, both hemispheres 31.1
2137 Male, age 80, left hemisphere 31.1
2620 Female, age 94, left hemisphere 23.8
2861 Female, age 67, both hemispheres 22.2
1891 Female, age 85, both hemispheres 14.9
2436 Male, age 74, both hemispheres 13.5
Parahippocampal cortex
nTPM: 14.5
1990 Female, age 91, right hemisphere 18.3
2532 Female, age 72, left hemisphere 18.1
1850 Male, age 80, both hemispheres 17.2
1933 Female, age 85, both hemispheres 16.8
2250 Female, age 67, right hemisphere 14.6
2622 Female, age 67, right hemisphere 14.0
2245 Female, age 91, both hemispheres 13.6
2693 Female, age 94, both hemispheres 13.1
2018 Male, age 76, both hemispheres 12.0
2692 Male, age 74, both hemispheres 7.7
Perirhinal gyrus
nTPM: 17.7
1841 Female, age 85, right hemisphere 22.8
1847 Female, age 91, left hemisphere 18.6
1794 Male, age 80, right hemisphere 18.4
2521 Female, age 94, right hemisphere 15.1
2848 Male, age 76, right hemisphere 13.6
Subiculum
nTPM: 12.6
2729 Female, age 91, right hemisphere 16.8
1901 Male, age 80, both hemispheres 15.4
1977 Female, age 85, both hemispheres 15.2
2042 Male, age 76, both hemispheres 12.6
2619 Male, age 74, both hemispheres 8.6
2438 Female, age 94, left hemisphere 6.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.2
Samples: 197

Max nTPM: 58.5
Min nTPM: 1.4
Std nTPM: 12.2
Median nTPM: 12.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 58.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 56.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 53.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 47.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 46.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 45.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 45.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 44.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 44.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 43.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.4
FF:10169-103B7 60 years, female 15.5
FF:10153-102I9 76 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 26.0
Min nTPM: 14.0
Sample A Female 26.0
Sample B Female 14.0
Sample C Male 20.5
Sample D Male 15.8
Dorsal hippocampus
nTPM: 32.4
Samples: 4

Max nTPM: 48.9
Min nTPM: 22.0
Sample A Female 48.9
Sample B Female 34.2
Sample C Male 22.0
Sample D Male 24.6
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 20.7
Min nTPM: 15.2
Sample A Female 15.2
Sample B Female 18.2
Sample C Male 20.7
Sample D Male 17.4
Ventral hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 40.8
Min nTPM: 23.2
Sample A Female 40.8
Sample B Female 23.2
Sample C Male 35.4
Sample D Male 34.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.6
Samples: 4

Max nTPM: 41.1
Min nTPM: 29.0
Sample A Male 34.3
Sample B Male 41.1
Sample C Female 29.9
Sample D Female 29.0
Hippocampal formation
nTPM: 33.8
Samples: 4

Max nTPM: 38.2
Min nTPM: 30.1
Sample A Male 38.2
Sample B Male 33.9
Sample C Female 32.9
Sample D Female 30.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
70743903 Antisense, RP_050725_02_A07, Mouse strain C57BL/6J (56 days, male) 7.4
67792179 Antisense, RP_040920_01_B08, Mouse strain C57BL/6J (56 days, male) 5.8

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