HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:3.2 nTPM
HPA Brain:13.6 nTPM
GTEx:3.2 nTPM
FANTOM5:9.1 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:35.5 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034496Antibody HPA034497
Glial cells Not detectedMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
1911 Female, age 85, right hemisphere 13.1
1855 Male, age 76, left hemisphere 12.5
2529 Female, age 94, left hemisphere 11.7
2148 Female, age 91, left hemisphere 11.3
2621 Female, age 67, right hemisphere 11.3
1898 Male, age 80, left hemisphere 10.3
Dentate gyrus
nTPM: 12.0
2010 Male, age 76, both hemispheres 14.2
1927 Female, age 91, both hemispheres 13.1
2528 Male, age 74, both hemispheres 11.8
2246 Female, age 85, both hemispheres 11.5
2531 Female, age 67, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.4
Entorhinal gyrus
nTPM: 11.0
1938 Female, age 85, left hemisphere 12.4
2117 Female, age 91, right hemisphere 12.0
1787 Male, age 76, left hemisphere 11.6
2764 Male, age 80, right hemisphere 10.8
2686 Male, age 75, right hemisphere 9.8
2613 Female, age 94, left hemisphere 9.5
Hippocampus, CA1
nTPM: 13.4
2749 Male, age 80, left hemisphere 17.1
2045 Male, age 76, both hemispheres 16.0
1873 Female, age 85, both hemispheres 12.1
2082 Female, age 91, right hemisphere 11.4
2527 Male, age 74, both hemispheres 10.6
Hippocampus, CA2
nTPM: 11.8
1892 Male, age 76, both hemispheres 13.7
1963 Male, age 80, left hemisphere 12.1
2113 Female, age 91, right hemisphere 11.9
2437 Female, age 94, left hemisphere 11.3
1940 Female, age 85, left hemisphere 11.1
2249 Male, age 74, both hemispheres 10.9
Hippocampus, CA3
nTPM: 13.6
2137 Male, age 80, left hemisphere 15.8
2436 Male, age 74, both hemispheres 14.1
1867 Male, age 76, both hemispheres 14.0
2620 Female, age 94, left hemisphere 13.4
1891 Female, age 85, both hemispheres 12.5
2861 Female, age 67, both hemispheres 11.9
Parahippocampal cortex
nTPM: 12.1
2018 Male, age 76, both hemispheres 12.8
2245 Female, age 91, both hemispheres 12.8
1933 Female, age 85, both hemispheres 12.6
2693 Female, age 94, both hemispheres 12.6
1850 Male, age 80, both hemispheres 12.3
2532 Female, age 72, left hemisphere 12.2
2250 Female, age 67, right hemisphere 12.1
1990 Female, age 91, right hemisphere 11.7
2692 Male, age 74, both hemispheres 11.5
2622 Female, age 67, right hemisphere 9.9
Perirhinal gyrus
nTPM: 12.4
2521 Female, age 94, right hemisphere 13.7
1841 Female, age 85, right hemisphere 12.9
2848 Male, age 76, right hemisphere 12.9
1794 Male, age 80, right hemisphere 11.5
1847 Female, age 91, left hemisphere 11.3
Subiculum
nTPM: 12.6
2042 Male, age 76, both hemispheres 15.4
1901 Male, age 80, both hemispheres 12.6
1977 Female, age 85, both hemispheres 12.6
2438 Female, age 94, left hemisphere 12.3
2729 Female, age 91, right hemisphere 11.5
2619 Male, age 74, both hemispheres 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.2
Samples: 197

Max nTPM: 8.1
Min nTPM: 1.5
Std nTPM: 0.9
Median nTPM: 3.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 8.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 5.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 5.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 5.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 5.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 5.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 5.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 5.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 5.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 5.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 5.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.1
FF:10169-103B7 60 years, female 9.3
FF:10153-102I9 76 years, female 8.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 11.5
Min nTPM: 10.7
Sample A Female 11.0
Sample B Female 10.7
Sample C Male 10.7
Sample D Male 11.5
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 11.2
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 10.6
Sample C Male 11.2
Sample D Male 11.2
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 11.2
Min nTPM: 10.1
Sample A Female 11.0
Sample B Female 11.0
Sample C Male 10.1
Sample D Male 11.2
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.9
Sample A Female 11.3
Sample B Female 11.0
Sample C Male 8.9
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.9
Samples: 4

Max nTPM: 30.0
Min nTPM: 26.9
Sample A Male 26.9
Sample B Male 27.1
Sample C Female 30.0
Sample D Female 27.6
Hippocampal formation
nTPM: 35.5
Samples: 4

Max nTPM: 37.1
Min nTPM: 33.0
Sample A Male 35.6
Sample B Male 37.1
Sample C Female 36.4
Sample D Female 33.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
76081901 Antisense, RP_060608_04_D05, Mouse strain C57BL/6J (56 days, male) 0.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org