HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:69.7 nTPM
HPA Brain:122.8 nTPM
GTEx:69.7 nTPM
FANTOM5:66.3 Scaled Tags Per Million
Pig:169.6 nTPM
Mouse:59.0 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017981Antibody HPA063005Antibody CAB037247
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.8
Sample id Sample description nTPM
Hippocampus
nTPM: 99.2
1898 Male, age 80, left hemisphere 140.4
1855 Male, age 76, left hemisphere 129.2
2621 Female, age 67, right hemisphere 126.6
2148 Female, age 91, left hemisphere 82.5
1911 Female, age 85, right hemisphere 78.1
2529 Female, age 94, left hemisphere 38.4
Dentate gyrus
nTPM: 122.8
2530 Female, age 94, left hemisphere 211.5
2010 Male, age 76, both hemispheres 163.1
1927 Female, age 91, both hemispheres 103.5
2246 Female, age 85, both hemispheres 90.3
2531 Female, age 67, both hemispheres 85.4
2528 Male, age 74, both hemispheres 83.2
Entorhinal gyrus
nTPM: 68.4
2764 Male, age 80, right hemisphere 88.5
1787 Male, age 76, left hemisphere 77.0
1938 Female, age 85, left hemisphere 76.0
2613 Female, age 94, left hemisphere 68.6
2686 Male, age 75, right hemisphere 56.8
2117 Female, age 91, right hemisphere 43.3
Hippocampus, CA1
nTPM: 114.2
2749 Male, age 80, left hemisphere 228.3
1873 Female, age 85, both hemispheres 158.6
2045 Male, age 76, both hemispheres 86.1
2527 Male, age 74, both hemispheres 56.0
2082 Female, age 91, right hemisphere 41.8
Hippocampus, CA2
nTPM: 111.7
1963 Male, age 80, left hemisphere 196.3
1892 Male, age 76, both hemispheres 169.3
2437 Female, age 94, left hemisphere 93.7
2249 Male, age 74, both hemispheres 92.0
1940 Female, age 85, left hemisphere 80.0
2113 Female, age 91, right hemisphere 38.7
Hippocampus, CA3
nTPM: 80.4
2861 Female, age 67, both hemispheres 91.9
2137 Male, age 80, left hemisphere 87.6
1867 Male, age 76, both hemispheres 87.3
2620 Female, age 94, left hemisphere 81.3
1891 Female, age 85, both hemispheres 76.2
2436 Male, age 74, both hemispheres 58.1
Parahippocampal cortex
nTPM: 64.3
2532 Female, age 72, left hemisphere 93.4
1933 Female, age 85, both hemispheres 87.9
1850 Male, age 80, both hemispheres 75.5
2250 Female, age 67, right hemisphere 62.2
2693 Female, age 94, both hemispheres 61.8
2622 Female, age 67, right hemisphere 59.4
2245 Female, age 91, both hemispheres 58.7
1990 Female, age 91, right hemisphere 53.9
2018 Male, age 76, both hemispheres 48.1
2692 Male, age 74, both hemispheres 41.9
Perirhinal gyrus
nTPM: 76.0
2521 Female, age 94, right hemisphere 87.0
1841 Female, age 85, right hemisphere 78.2
1847 Female, age 91, left hemisphere 76.4
1794 Male, age 80, right hemisphere 73.3
2848 Male, age 76, right hemisphere 65.3
Subiculum
nTPM: 65.6
1977 Female, age 85, both hemispheres 91.9
1901 Male, age 80, both hemispheres 80.1
2042 Male, age 76, both hemispheres 77.6
2438 Female, age 94, left hemisphere 53.0
2729 Female, age 91, right hemisphere 45.8
2619 Male, age 74, both hemispheres 45.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.7
Samples: 197

Max nTPM: 198.3
Min nTPM: 8.6
Std nTPM: 41.5
Median nTPM: 58.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 198.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 198.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 196.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 193.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 177.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 171.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 170.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 157.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 156.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 151.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 147.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.3
FF:10169-103B7 60 years, female 76.8
FF:10153-102I9 76 years, female 55.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 169.6
Pig sample Sample description nTPM
Subiculum
nTPM: 113.8
Samples: 4

Max nTPM: 142.3
Min nTPM: 95.6
Sample A Female 142.3
Sample B Female 95.6
Sample C Male 118.4
Sample D Male 98.9
Dorsal hippocampus
nTPM: 169.6
Samples: 4

Max nTPM: 242.7
Min nTPM: 108.9
Sample A Female 242.7
Sample B Female 217.4
Sample C Male 109.3
Sample D Male 108.9
Entorhinal cortex
nTPM: 107.0
Samples: 4

Max nTPM: 121.3
Min nTPM: 88.9
Sample A Female 121.3
Sample B Female 88.9
Sample C Male 118.8
Sample D Male 99.0
Ventral hippocampus
nTPM: 150.1
Samples: 4

Max nTPM: 216.2
Min nTPM: 81.1
Sample A Female 151.7
Sample B Female 81.1
Sample C Male 151.4
Sample D Male 216.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.0
Samples: 4

Max nTPM: 73.4
Min nTPM: 46.3
Sample A Male 58.4
Sample B Male 57.8
Sample C Female 46.3
Sample D Female 73.4
Hippocampal formation
nTPM: 44.2
Samples: 4

Max nTPM: 50.5
Min nTPM: 40.8
Sample A Male 41.3
Sample B Male 40.8
Sample C Female 50.5
Sample D Female 44.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
71016721 Antisense, RP_050808_02_A09, Mouse strain C57BL/6J (56 days, male) 5.5
671229 Antisense, RP_040914_01_H04, Mouse strain C57BL/6J (56 days, male) 2.5

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