HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:148.8 nTPM
HPA Brain:138.1 nTPM
GTEx:148.8 nTPM
FANTOM5:148.4 Scaled Tags Per Million
Pig:167.4 nTPM
Mouse:97.8 nTPM
Allen mouse:18.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075447
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 138.1
Sample id Sample description nTPM
Hippocampus
nTPM: 123.2
1898 Male, age 80, left hemisphere 147.7
2529 Female, age 94, left hemisphere 132.4
1911 Female, age 85, right hemisphere 124.9
1855 Male, age 76, left hemisphere 117.9
2621 Female, age 67, right hemisphere 108.6
2148 Female, age 91, left hemisphere 107.6
Dentate gyrus
nTPM: 121.2
2010 Male, age 76, both hemispheres 169.0
2530 Female, age 94, left hemisphere 136.5
2528 Male, age 74, both hemispheres 121.3
1927 Female, age 91, both hemispheres 107.4
2246 Female, age 85, both hemispheres 107.4
2531 Female, age 67, both hemispheres 85.8
Entorhinal gyrus
nTPM: 118.7
2117 Female, age 91, right hemisphere 157.3
2764 Male, age 80, right hemisphere 129.3
1938 Female, age 85, left hemisphere 124.9
1787 Male, age 76, left hemisphere 117.9
2686 Male, age 75, right hemisphere 94.8
2613 Female, age 94, left hemisphere 88.3
Hippocampus, CA1
nTPM: 127.0
2749 Male, age 80, left hemisphere 142.8
1873 Female, age 85, both hemispheres 129.3
2527 Male, age 74, both hemispheres 128.2
2045 Male, age 76, both hemispheres 117.7
2082 Female, age 91, right hemisphere 117.1
Hippocampus, CA2
nTPM: 138.1
2249 Male, age 74, both hemispheres 179.5
1892 Male, age 76, both hemispheres 140.1
1963 Male, age 80, left hemisphere 138.0
1940 Female, age 85, left hemisphere 134.5
2113 Female, age 91, right hemisphere 123.0
2437 Female, age 94, left hemisphere 113.7
Hippocampus, CA3
nTPM: 126.5
2436 Male, age 74, both hemispheres 200.0
1867 Male, age 76, both hemispheres 150.5
1891 Female, age 85, both hemispheres 134.2
2137 Male, age 80, left hemisphere 111.8
2620 Female, age 94, left hemisphere 84.9
2861 Female, age 67, both hemispheres 77.4
Parahippocampal cortex
nTPM: 114.3
2018 Male, age 76, both hemispheres 155.6
1850 Male, age 80, both hemispheres 132.9
1990 Female, age 91, right hemisphere 131.1
1933 Female, age 85, both hemispheres 128.8
2250 Female, age 67, right hemisphere 115.2
2532 Female, age 72, left hemisphere 109.9
2245 Female, age 91, both hemispheres 107.7
2692 Male, age 74, both hemispheres 98.6
2693 Female, age 94, both hemispheres 97.3
2622 Female, age 67, right hemisphere 66.2
Perirhinal gyrus
nTPM: 123.6
1841 Female, age 85, right hemisphere 135.0
1794 Male, age 80, right hemisphere 134.7
1847 Female, age 91, left hemisphere 130.6
2848 Male, age 76, right hemisphere 108.9
2521 Female, age 94, right hemisphere 108.8
Subiculum
nTPM: 131.9
2042 Male, age 76, both hemispheres 151.8
1901 Male, age 80, both hemispheres 149.3
1977 Female, age 85, both hemispheres 139.3
2729 Female, age 91, right hemisphere 130.6
2438 Female, age 94, left hemisphere 110.7
2619 Male, age 74, both hemispheres 109.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 148.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 148.8
Samples: 197

Max nTPM: 261.2
Min nTPM: 67.0
Std nTPM: 39.6
Median nTPM: 141.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 261.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 254.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 232.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 230.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 230.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 225.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 224.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 224.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 223.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 222.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 222.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 148.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.4
FF:10153-102I9 76 years, female 149.4
FF:10169-103B7 60 years, female 147.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 167.4
Pig sample Sample description nTPM
Subiculum
nTPM: 146.3
Samples: 4

Max nTPM: 176.5
Min nTPM: 133.6
Sample A Female 176.5
Sample B Female 138.1
Sample C Male 133.6
Sample D Male 136.9
Dorsal hippocampus
nTPM: 167.4
Samples: 4

Max nTPM: 209.1
Min nTPM: 122.4
Sample A Female 209.1
Sample B Female 160.5
Sample C Male 177.4
Sample D Male 122.4
Entorhinal cortex
nTPM: 142.7
Samples: 4

Max nTPM: 160.2
Min nTPM: 120.7
Sample A Female 141.5
Sample B Female 160.2
Sample C Male 148.5
Sample D Male 120.7
Ventral hippocampus
nTPM: 151.7
Samples: 4

Max nTPM: 182.9
Min nTPM: 129.9
Sample A Female 182.9
Sample B Female 129.9
Sample C Male 154.0
Sample D Male 140.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.9
Samples: 4

Max nTPM: 112.2
Min nTPM: 81.8
Sample A Male 81.8
Sample B Male 112.2
Sample C Female 87.6
Sample D Female 89.8
Hippocampal formation
nTPM: 97.8
Samples: 4

Max nTPM: 118.2
Min nTPM: 82.0
Sample A Male 89.6
Sample B Male 82.0
Sample C Female 101.2
Sample D Female 118.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.1
69015793 Antisense, RP_050315_01_G01, Mouse strain C57BL/6J (56 days, male) 18.1

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