We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
240.7
nTPM
FANTOM5:
115.8
Scaled Tags Per Million
Pig:
67.0
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
240.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 136.2
2301
Female, age 85, both hemispheres
155.7
1984
Male, age 76, both hemispheres
153.6
2188
Female, age 91, both hemispheres
126.8
2090
Male, age 80, both hemispheres
108.7
Dorsal cochlear nucleus nTPM: 115.8
2187
Female, age 91, both hemispheres
145.6
2058
Male, age 76, both hemispheres
122.9
2370
Male, age 61, both hemispheres
121.0
2378
Male, age 80, both hemispheres
97.7
2802
Male, age 74, right hemisphere
91.8
Dorsal tegmental nucleus nTPM: 157.1
1936
Male, age 76, left hemisphere
193.2
2358
Male, age 61, both hemispheres
162.3
2083
Male, age 80, both hemispheres
161.9
2326
Male, age 74, both hemispheres
111.0
Dorsolateral tegmental area nTPM: 150.9
2360
Male, age 74, both hemispheres
164.4
2141
Male, age 76, both hemispheres
162.6
2654
Male, age 80, both hemispheres
157.2
2751
Female, age 85, both hemispheres
140.1
2337
Male, age 61, both hemispheres
130.1
Kolliker-Fuse nucleus nTPM: 236.0
2315
Male, age 76, right hemisphere
325.4
2163
Male, age 80, both hemispheres
247.2
2793
Female, age 91, left hemisphere
135.5
Lateral lemniscal nuclei nTPM: 158.7
2746
Female, age 85, left hemisphere
213.4
2169
Male, age 76, both hemispheres
212.7
2453
Male, age 74, right hemisphere
137.4
2036
Male, age 80, both hemispheres
130.4
2320
Female, age 91, left hemisphere
99.6
Lateral parabrachial nucleus nTPM: 203.2
2139
Female, age 85, right hemisphere
267.1
2013
Male, age 80, both hemispheres
201.9
2792
Male, age 76, both hemispheres
198.0
2790
Male, age 61, both hemispheres
146.0
Lateral vestibular nucleus nTPM: 214.8
2184
Male, age 76, both hemispheres
252.1
2311
Male, age 80, both hemispheres
177.5
Locus coeruleus nTPM: 240.7
2123
Female, age 91, both hemispheres
344.2
1980
Male, age 76, both hemispheres
262.2
2014
Male, age 55, unknown
254.4
2317
Female, age 72, unknown
235.5
2720
Male, age 74, both hemispheres
205.5
2162
Male, age 80, both hemispheres
192.1
2788
Male, age 74, unknown
191.1
Medial parabrachial nucleus nTPM: 165.0
2170
Female, age 91, both hemispheres
180.7
2854
Male, age 80, both hemispheres
171.4
2156
Male, age 61, both hemispheres
164.1
2786
Male, age 76, both hemispheres
160.2
2463
Female, age 85, right hemisphere
148.7
Medial periolivary nuclei nTPM: 190.1
2063
Male, age 76, both hemispheres
260.9
2171
Female, age 85, both hemispheres
258.5
2791
Male, age 74, right hemisphere
194.9
2081
Male, age 80, both hemispheres
133.0
2458
Female, age 91, both hemispheres
103.3
Motor facial nucleus nTPM: 188.7
2062
Male, age 76, both hemispheres
304.9
2126
Male, age 61, both hemispheres
172.4
2365
Male, age 74, right hemisphere
169.7
2697
Female, age 85, both hemispheres
169.6
2795
Female, age 91, both hemispheres
162.8
2327
Male, age 80, both hemispheres
152.8
Motor trigeminal nucleus nTPM: 142.9
2079
Male, age 80, both hemispheres
180.9
2335
Male, age 61, both hemispheres
154.0
2309
Male, age 76, both hemispheres
151.1
2560
Male, age 74, both hemispheres
123.1
2321
Female, age 91, both hemispheres
105.4
Nuclei of the trapezoid body nTPM: 223.0
1983
Male, age 76, both hemispheres
290.6
2159
Male, age 61, both hemispheres
265.3
2735
Female, age 85, both hemispheres
256.7
2166
Male, age 80, both hemispheres
167.2
2368
Female, age 91, both hemispheres
135.0
Nucleus raphe magnus nTPM: 210.0
2160
Male, age 61, both hemispheres
318.1
2172
Female, age 85, both hemispheres
252.4
2051
Male, age 76, both hemispheres
245.0
2455
Male, age 74, both hemispheres
171.7
2328
Male, age 80, both hemispheres
167.7
2459
Female, age 91, both hemispheres
105.0
Paramedian reticular nucleus nTPM: 175.6
2057
Male, age 80, both hemispheres
205.4
2050
Female, age 85, both hemispheres
188.9
2313
Male, age 61, both hemispheres
188.4
2052
Male, age 76, both hemispheres
119.5
Pedunculopontine tegmental nucleus nTPM: 157.4
2334
Male, age 80, both hemispheres
173.6
1921
Female, age 85, both hemispheres
173.0
2338
Male, age 61, both hemispheres
125.8
Pontine nuclei nTPM: 199.6
2787
Female, age 85, both hemispheres
308.8
2727
Male, age 61, right hemisphere
270.6
1968
Male, age 76, left hemisphere
262.1
1863
Male, age 55, unknown
234.3
2109
Female, age 72, unknown
175.9
2115
Male, age 80, left hemisphere
169.9
2319
Female, age 91, both hemispheres
103.3
2454
Male, age 74, left hemisphere
71.9
Pontine raphe nucleus nTPM: 195.9
2853
Male, age 76, midline
198.8
2122
Female, age 85, midline
193.0
Posteroventral cochlear nucleus nTPM: 129.6
2752
Female, age 85, both hemispheres
175.2
2371
Male, age 61, both hemispheres
144.9
2070
Male, age 76, both hemispheres
142.1
2341
Male, age 80, both hemispheres
96.1
2135
Female, age 91, both hemispheres
89.8
Principal sensory trigeminal nucleus nTPM: 205.6
2158
Male, age 61, both hemispheres
300.2
2324
Male, age 76, both hemispheres
225.3
2008
Male, age 80, left hemisphere
197.6
2367
Female, age 91, left hemisphere
99.4
Reticular pontine nucleus, caudal nTPM: 146.1
2092
Male, age 76, both hemispheres
220.9
2332
Male, age 80, right hemisphere
181.9
2457
Female, age 91, both hemispheres
101.8
2559
Male, age 74, both hemispheres
79.7
Reticular pontine nucleus, oral nTPM: 142.8
2012
Female, age 85, both hemispheres
180.3
2167
Male, age 76, both hemispheres
165.6
1939
Male, age 80, both hemispheres
165.5
2361
Male, age 74, both hemispheres
110.1
2366
Female, age 91, both hemispheres
92.5
Reticulotegmental nucleus nTPM: 148.1
2325
Male, age 76, both hemispheres
211.8
2333
Male, age 80, both hemispheres
142.1
2322
Female, age 91, both hemispheres
134.5
2452
Male, age 74, both hemispheres
104.1
Spinal trigeminal nucleus, oral nTPM: 190.7
2164
Male, age 80, both hemispheres
227.5
2737
Female, age 85, both hemispheres
201.2
1978
Male, age 76, both hemispheres
143.4
Subcoeruleus area nTPM: 153.1
1958
Male, age 80, both hemispheres
189.9
2089
Male, age 76, left hemisphere
185.3
2323
Female, age 91, left hemisphere
159.9
2369
Female, age 85, left hemisphere
118.6
2451
Male, age 74, both hemispheres
112.0
Superior olive nTPM: 178.3
1875
Female, age 85, both hemispheres
219.7
2364
Male, age 74, right hemisphere
194.5
2020
Male, age 76, both hemispheres
194.1
2329
Male, age 80, right hemisphere
150.9
2561
Female, age 91, both hemispheres
132.1
Ventral periolivary nuclei nTPM: 190.2
2130
Female, age 85, both hemispheres
235.3
2165
Male, age 80, both hemispheres
232.4
2023
Male, age 76, both hemispheres
167.2
2794
Female, age 91, left hemisphere
126.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 167.0
1959
Male, age 76, both hemispheres
219.1
2840
Female, age 85, both hemispheres
184.9
2161
Male, age 80, both hemispheres
169.3
2359
Male, age 61, both hemispheres
161.7
2449
Male, age 74, both hemispheres
152.2
2456
Female, age 91, both hemispheres
114.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
