HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:63.3 nTPM
HPA Brain:59.1 nTPM
GTEx:63.3 nTPM
FANTOM5:83.2 Scaled Tags Per Million
Pig:111.4 nTPM
Mouse:222.3 nTPM
Allen mouse:19.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002868Antibody CAB009822Antibody CAB068233Antibody CAB068234Antibody CAB068235
Glial cells HighMediumLowHighHigh
Neuronal cells MediumLowMediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.1
Sample id Sample description nTPM
Hippocampus
nTPM: 51.4
1898 Male, age 80, left hemisphere 66.9
2529 Female, age 94, left hemisphere 51.1
1855 Male, age 76, left hemisphere 50.2
2621 Female, age 67, right hemisphere 47.4
1911 Female, age 85, right hemisphere 46.9
2148 Female, age 91, left hemisphere 46.2
Dentate gyrus
nTPM: 53.3
2010 Male, age 76, both hemispheres 61.0
2528 Male, age 74, both hemispheres 56.2
1927 Female, age 91, both hemispheres 55.8
2246 Female, age 85, both hemispheres 52.2
2530 Female, age 94, left hemisphere 51.1
2531 Female, age 67, both hemispheres 43.8
Entorhinal gyrus
nTPM: 46.2
2117 Female, age 91, right hemisphere 54.3
2764 Male, age 80, right hemisphere 52.3
1938 Female, age 85, left hemisphere 50.6
1787 Male, age 76, left hemisphere 50.4
2613 Female, age 94, left hemisphere 37.2
2686 Male, age 75, right hemisphere 32.5
Hippocampus, CA1
nTPM: 59.1
2749 Male, age 80, left hemisphere 84.0
2527 Male, age 74, both hemispheres 59.7
1873 Female, age 85, both hemispheres 58.8
2082 Female, age 91, right hemisphere 46.8
2045 Male, age 76, both hemispheres 46.4
Hippocampus, CA2
nTPM: 55.7
2249 Male, age 74, both hemispheres 75.5
1963 Male, age 80, left hemisphere 57.2
1892 Male, age 76, both hemispheres 56.3
2437 Female, age 94, left hemisphere 52.3
1940 Female, age 85, left hemisphere 48.1
2113 Female, age 91, right hemisphere 44.6
Hippocampus, CA3
nTPM: 54.9
2436 Male, age 74, both hemispheres 78.7
2137 Male, age 80, left hemisphere 61.7
1867 Male, age 76, both hemispheres 54.4
1891 Female, age 85, both hemispheres 54.2
2620 Female, age 94, left hemisphere 46.0
2861 Female, age 67, both hemispheres 34.5
Parahippocampal cortex
nTPM: 50.7
1850 Male, age 80, both hemispheres 59.7
2250 Female, age 67, right hemisphere 58.8
1990 Female, age 91, right hemisphere 56.5
1933 Female, age 85, both hemispheres 54.4
2245 Female, age 91, both hemispheres 51.5
2018 Male, age 76, both hemispheres 50.7
2532 Female, age 72, left hemisphere 46.9
2692 Male, age 74, both hemispheres 44.3
2693 Female, age 94, both hemispheres 44.0
2622 Female, age 67, right hemisphere 39.9
Perirhinal gyrus
nTPM: 55.6
1847 Female, age 91, left hemisphere 64.7
1794 Male, age 80, right hemisphere 61.9
1841 Female, age 85, right hemisphere 55.6
2521 Female, age 94, right hemisphere 51.9
2848 Male, age 76, right hemisphere 43.8
Subiculum
nTPM: 52.0
1901 Male, age 80, both hemispheres 57.8
1977 Female, age 85, both hemispheres 57.3
2619 Male, age 74, both hemispheres 55.3
2042 Male, age 76, both hemispheres 48.6
2438 Female, age 94, left hemisphere 48.0
2729 Female, age 91, right hemisphere 45.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.3
Samples: 197

Max nTPM: 151.4
Min nTPM: 39.3
Std nTPM: 13.9
Median nTPM: 61.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 151.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 102.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 98.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 94.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 92.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 91.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 90.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 90.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 87.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 87.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 86.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.2
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 74.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 111.4
Pig sample Sample description nTPM
Subiculum
nTPM: 88.8
Samples: 4

Max nTPM: 118.8
Min nTPM: 76.6
Sample A Female 118.8
Sample B Female 79.5
Sample C Male 80.2
Sample D Male 76.6
Dorsal hippocampus
nTPM: 111.4
Samples: 4

Max nTPM: 143.6
Min nTPM: 86.2
Sample A Female 143.6
Sample B Female 105.6
Sample C Male 110.2
Sample D Male 86.2
Entorhinal cortex
nTPM: 94.9
Samples: 4

Max nTPM: 115.0
Min nTPM: 79.7
Sample A Female 95.1
Sample B Female 115.0
Sample C Male 89.7
Sample D Male 79.7
Ventral hippocampus
nTPM: 102.4
Samples: 4

Max nTPM: 112.8
Min nTPM: 76.5
Sample A Female 112.2
Sample B Female 76.5
Sample C Male 112.8
Sample D Male 107.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 222.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 221.5
Samples: 4

Max nTPM: 230.2
Min nTPM: 212.7
Sample A Male 220.4
Sample B Male 230.2
Sample C Female 222.7
Sample D Female 212.7
Hippocampal formation
nTPM: 222.3
Samples: 4

Max nTPM: 256.4
Min nTPM: 201.8
Sample A Male 256.4
Sample B Male 207.4
Sample C Female 201.8
Sample D Female 223.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.2
686214 Antisense, RP_040916_01_B12, Mouse strain C57BL/6J (56 days, male) 22.4
74658140 Antisense, RP_060220_02_C09, Mouse strain C57BL/6J (56 days, male) 15.9

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