HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:75.3 nTPM
HPA Brain:78.7 nTPM
GTEx:75.3 nTPM
FANTOM5:27.4 Scaled Tags Per Million
Pig:126.9 nTPM
Mouse:92.6 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013386
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.7
Sample id Sample description nTPM
Hippocampus
nTPM: 71.9
2529 Female, age 94, left hemisphere 82.8
1898 Male, age 80, left hemisphere 81.2
1911 Female, age 85, right hemisphere 69.3
2148 Female, age 91, left hemisphere 68.4
1855 Male, age 76, left hemisphere 66.1
2621 Female, age 67, right hemisphere 63.5
Dentate gyrus
nTPM: 70.6
2010 Male, age 76, both hemispheres 85.2
2530 Female, age 94, left hemisphere 82.8
2528 Male, age 74, both hemispheres 82.0
2246 Female, age 85, both hemispheres 65.1
1927 Female, age 91, both hemispheres 58.6
2531 Female, age 67, both hemispheres 49.6
Entorhinal gyrus
nTPM: 61.6
2117 Female, age 91, right hemisphere 79.7
1938 Female, age 85, left hemisphere 69.5
1787 Male, age 76, left hemisphere 68.7
2764 Male, age 80, right hemisphere 57.1
2686 Male, age 75, right hemisphere 48.3
2613 Female, age 94, left hemisphere 46.5
Hippocampus, CA1
nTPM: 71.3
2527 Male, age 74, both hemispheres 80.2
1873 Female, age 85, both hemispheres 79.2
2045 Male, age 76, both hemispheres 67.5
2082 Female, age 91, right hemisphere 65.6
2749 Male, age 80, left hemisphere 64.2
Hippocampus, CA2
nTPM: 73.6
2249 Male, age 74, both hemispheres 102.2
1892 Male, age 76, both hemispheres 76.7
1963 Male, age 80, left hemisphere 73.6
2113 Female, age 91, right hemisphere 64.1
2437 Female, age 94, left hemisphere 63.6
1940 Female, age 85, left hemisphere 61.1
Hippocampus, CA3
nTPM: 65.0
1891 Female, age 85, both hemispheres 78.2
1867 Male, age 76, both hemispheres 76.8
2436 Male, age 74, both hemispheres 74.9
2620 Female, age 94, left hemisphere 57.1
2137 Male, age 80, left hemisphere 56.8
2861 Female, age 67, both hemispheres 46.0
Parahippocampal cortex
nTPM: 67.2
2018 Male, age 76, both hemispheres 78.0
1850 Male, age 80, both hemispheres 74.4
2250 Female, age 67, right hemisphere 73.7
1933 Female, age 85, both hemispheres 70.4
2245 Female, age 91, both hemispheres 68.8
1990 Female, age 91, right hemisphere 65.7
2532 Female, age 72, left hemisphere 65.4
2692 Male, age 74, both hemispheres 65.0
2693 Female, age 94, both hemispheres 59.8
2622 Female, age 67, right hemisphere 50.8
Perirhinal gyrus
nTPM: 68.7
1841 Female, age 85, right hemisphere 74.7
1847 Female, age 91, left hemisphere 73.2
1794 Male, age 80, right hemisphere 69.6
2521 Female, age 94, right hemisphere 68.7
2848 Male, age 76, right hemisphere 57.2
Subiculum
nTPM: 78.7
2438 Female, age 94, left hemisphere 92.9
2042 Male, age 76, both hemispheres 82.3
2619 Male, age 74, both hemispheres 75.7
2729 Female, age 91, right hemisphere 75.7
1901 Male, age 80, both hemispheres 74.6
1977 Female, age 85, both hemispheres 70.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.3
Samples: 197

Max nTPM: 114.8
Min nTPM: 41.2
Std nTPM: 13.7
Median nTPM: 76.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 114.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 113.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 112.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 110.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 102.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 101.4
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 101.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 99.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 97.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 97.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 97.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.4
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 19.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 126.9
Pig sample Sample description nTPM
Subiculum
nTPM: 113.9
Samples: 4

Max nTPM: 145.1
Min nTPM: 99.1
Sample A Female 145.1
Sample B Female 105.1
Sample C Male 99.1
Sample D Male 106.4
Dorsal hippocampus
nTPM: 126.9
Samples: 4

Max nTPM: 164.0
Min nTPM: 90.4
Sample A Female 164.0
Sample B Female 116.4
Sample C Male 136.8
Sample D Male 90.4
Entorhinal cortex
nTPM: 108.7
Samples: 4

Max nTPM: 132.4
Min nTPM: 89.1
Sample A Female 104.8
Sample B Female 132.4
Sample C Male 108.4
Sample D Male 89.1
Ventral hippocampus
nTPM: 118.4
Samples: 4

Max nTPM: 134.3
Min nTPM: 103.1
Sample A Female 134.3
Sample B Female 103.1
Sample C Male 124.6
Sample D Male 111.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.1
Samples: 4

Max nTPM: 95.4
Min nTPM: 80.0
Sample A Male 80.0
Sample B Male 85.9
Sample C Female 95.4
Sample D Female 90.9
Hippocampal formation
nTPM: 92.6
Samples: 4

Max nTPM: 97.4
Min nTPM: 86.1
Sample A Male 97.4
Sample B Male 86.1
Sample C Female 93.4
Sample D Female 93.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
68667312 Antisense, RP_050201_02_A06, Mouse strain C57BL/6J (56 days, male) 3.3

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