HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:116.0 nTPM
HPA Brain:62.1 nTPM
GTEx:116.0 nTPM
FANTOM5:155.8 Scaled Tags Per Million
Pig:38.9 nTPM
Mouse:87.1 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027971Antibody HPA063572Antibody CAB018370
Glial cells HighMediumHigh
Neuronal cells Not detectedNot detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.1
Sample id Sample description nTPM
Hippocampus
nTPM: 62.1
2529 Female, age 94, left hemisphere 70.5
2621 Female, age 67, right hemisphere 61.7
2148 Female, age 91, left hemisphere 61.5
1911 Female, age 85, right hemisphere 60.5
1898 Male, age 80, left hemisphere 59.7
1855 Male, age 76, left hemisphere 58.5
Dentate gyrus
nTPM: 56.7
2246 Female, age 85, both hemispheres 66.0
1927 Female, age 91, both hemispheres 61.4
2010 Male, age 76, both hemispheres 57.7
2530 Female, age 94, left hemisphere 53.1
2531 Female, age 67, both hemispheres 51.4
2528 Male, age 74, both hemispheres 50.3
Entorhinal gyrus
nTPM: 55.1
2117 Female, age 91, right hemisphere 66.6
1938 Female, age 85, left hemisphere 65.5
1787 Male, age 76, left hemisphere 60.6
2686 Male, age 75, right hemisphere 49.2
2764 Male, age 80, right hemisphere 45.8
2613 Female, age 94, left hemisphere 43.1
Hippocampus, CA1
nTPM: 56.5
2527 Male, age 74, both hemispheres 62.7
1873 Female, age 85, both hemispheres 61.6
2045 Male, age 76, both hemispheres 61.0
2082 Female, age 91, right hemisphere 51.6
2749 Male, age 80, left hemisphere 45.8
Hippocampus, CA2
nTPM: 59.8
1940 Female, age 85, left hemisphere 81.0
2249 Male, age 74, both hemispheres 57.3
1963 Male, age 80, left hemisphere 57.0
2437 Female, age 94, left hemisphere 54.8
1892 Male, age 76, both hemispheres 54.3
2113 Female, age 91, right hemisphere 54.0
Hippocampus, CA3
nTPM: 56.1
2436 Male, age 74, both hemispheres 72.7
1891 Female, age 85, both hemispheres 67.9
1867 Male, age 76, both hemispheres 51.0
2620 Female, age 94, left hemisphere 50.6
2861 Female, age 67, both hemispheres 49.9
2137 Male, age 80, left hemisphere 44.9
Parahippocampal cortex
nTPM: 61.0
1933 Female, age 85, both hemispheres 67.0
2245 Female, age 91, both hemispheres 65.1
2250 Female, age 67, right hemisphere 64.9
2692 Male, age 74, both hemispheres 64.2
2693 Female, age 94, both hemispheres 60.3
2532 Female, age 72, left hemisphere 59.3
2622 Female, age 67, right hemisphere 58.6
1990 Female, age 91, right hemisphere 58.5
1850 Male, age 80, both hemispheres 57.1
2018 Male, age 76, both hemispheres 54.7
Perirhinal gyrus
nTPM: 55.4
2521 Female, age 94, right hemisphere 60.7
2848 Male, age 76, right hemisphere 59.6
1841 Female, age 85, right hemisphere 55.5
1794 Male, age 80, right hemisphere 55.1
1847 Female, age 91, left hemisphere 46.1
Subiculum
nTPM: 60.5
2438 Female, age 94, left hemisphere 65.7
2619 Male, age 74, both hemispheres 62.0
1977 Female, age 85, both hemispheres 61.3
2042 Male, age 76, both hemispheres 59.7
2729 Female, age 91, right hemisphere 58.2
1901 Male, age 80, both hemispheres 56.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 116.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 116.0
Samples: 197

Max nTPM: 222.9
Min nTPM: 56.4
Std nTPM: 24.1
Median nTPM: 114.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 222.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 186.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 185.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 179.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 177.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 173.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 172.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 170.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 166.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 165.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 162.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 155.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 155.8
FF:10153-102I9 76 years, female 200.5
FF:10169-103B7 60 years, female 111.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.9
Pig sample Sample description nTPM
Subiculum
nTPM: 34.9
Samples: 4

Max nTPM: 45.1
Min nTPM: 27.8
Sample A Female 45.1
Sample B Female 31.8
Sample C Male 27.8
Sample D Male 34.7
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 43.6
Min nTPM: 32.9
Sample A Female 43.6
Sample B Female 36.7
Sample C Male 32.9
Sample D Male 42.4
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 35.2
Min nTPM: 27.1
Sample A Female 34.0
Sample B Female 35.0
Sample C Male 35.2
Sample D Male 27.1
Ventral hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 35.9
Min nTPM: 31.1
Sample A Female 35.9
Sample B Female 33.5
Sample C Male 34.9
Sample D Male 31.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.0
Samples: 4

Max nTPM: 85.7
Min nTPM: 67.5
Sample A Male 77.4
Sample B Male 85.7
Sample C Female 81.4
Sample D Female 67.5
Hippocampal formation
nTPM: 87.1
Samples: 4

Max nTPM: 91.2
Min nTPM: 81.1
Sample A Male 91.2
Sample B Male 89.5
Sample C Female 81.1
Sample D Female 86.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69059927 Antisense, RP_050317_04_E08, Mouse strain C57BL/6J (56 days, male) 3.4

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