HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.7 nTPM
HPA Brain:91.0 nTPM
GTEx:46.7 nTPM
FANTOM5:113.4 Scaled Tags Per Million
Pig:98.5 nTPM
Mouse:131.4 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019352Antibody HPA024099Antibody HPA030387
Glial cells MediumNot detectedNot detected
Neuronal cells HighLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.0
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1898 Male, age 80, left hemisphere 54.6
1911 Female, age 85, right hemisphere 40.6
2621 Female, age 67, right hemisphere 34.2
2529 Female, age 94, left hemisphere 20.0
1855 Male, age 76, left hemisphere 18.5
2148 Female, age 91, left hemisphere 10.7
Dentate gyrus
nTPM: 30.8
2246 Female, age 85, both hemispheres 50.7
2531 Female, age 67, both hemispheres 40.3
2010 Male, age 76, both hemispheres 30.3
1927 Female, age 91, both hemispheres 28.3
2530 Female, age 94, left hemisphere 19.9
2528 Male, age 74, both hemispheres 15.2
Entorhinal gyrus
nTPM: 71.2
1938 Female, age 85, left hemisphere 117.1
2764 Male, age 80, right hemisphere 88.6
2613 Female, age 94, left hemisphere 85.8
1787 Male, age 76, left hemisphere 66.5
2686 Male, age 75, right hemisphere 36.4
2117 Female, age 91, right hemisphere 32.8
Hippocampus, CA1
nTPM: 43.0
2749 Male, age 80, left hemisphere 92.0
2082 Female, age 91, right hemisphere 36.1
1873 Female, age 85, both hemispheres 33.6
2527 Male, age 74, both hemispheres 30.3
2045 Male, age 76, both hemispheres 23.0
Hippocampus, CA2
nTPM: 33.7
1892 Male, age 76, both hemispheres 47.1
1940 Female, age 85, left hemisphere 36.9
2437 Female, age 94, left hemisphere 33.2
2113 Female, age 91, right hemisphere 33.1
1963 Male, age 80, left hemisphere 27.1
2249 Male, age 74, both hemispheres 24.8
Hippocampus, CA3
nTPM: 52.0
2137 Male, age 80, left hemisphere 102.5
1867 Male, age 76, both hemispheres 59.8
1891 Female, age 85, both hemispheres 54.9
2436 Male, age 74, both hemispheres 35.5
2620 Female, age 94, left hemisphere 30.2
2861 Female, age 67, both hemispheres 29.4
Parahippocampal cortex
nTPM: 63.3
1933 Female, age 85, both hemispheres 97.7
1850 Male, age 80, both hemispheres 95.6
1990 Female, age 91, right hemisphere 80.2
2250 Female, age 67, right hemisphere 67.9
2245 Female, age 91, both hemispheres 63.3
2693 Female, age 94, both hemispheres 61.2
2532 Female, age 72, left hemisphere 60.2
2018 Male, age 76, both hemispheres 45.0
2622 Female, age 67, right hemisphere 37.8
2692 Male, age 74, both hemispheres 24.2
Perirhinal gyrus
nTPM: 91.0
1847 Female, age 91, left hemisphere 135.3
1841 Female, age 85, right hemisphere 95.2
2848 Male, age 76, right hemisphere 83.3
1794 Male, age 80, right hemisphere 75.9
2521 Female, age 94, right hemisphere 65.2
Subiculum
nTPM: 49.3
1977 Female, age 85, both hemispheres 89.9
1901 Male, age 80, both hemispheres 77.0
2438 Female, age 94, left hemisphere 58.4
2042 Male, age 76, both hemispheres 35.3
2619 Male, age 74, both hemispheres 23.4
2729 Female, age 91, right hemisphere 12.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.7
Samples: 197

Max nTPM: 230.3
Min nTPM: 0.4
Std nTPM: 34.0
Median nTPM: 41.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 230.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 157.9
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 128.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 122.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 122.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 122.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 114.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 108.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 108.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 106.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 105.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.4
FF:10169-103B7 60 years, female 139.1
FF:10153-102I9 76 years, female 87.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.5
Pig sample Sample description nTPM
Subiculum
nTPM: 98.5
Samples: 4

Max nTPM: 109.3
Min nTPM: 86.7
Sample A Female 109.3
Sample B Female 86.7
Sample C Male 101.0
Sample D Male 96.9
Dorsal hippocampus
nTPM: 58.2
Samples: 4

Max nTPM: 75.8
Min nTPM: 38.1
Sample A Female 53.4
Sample B Female 65.4
Sample C Male 75.8
Sample D Male 38.1
Entorhinal cortex
nTPM: 81.3
Samples: 4

Max nTPM: 89.9
Min nTPM: 71.0
Sample A Female 89.9
Sample B Female 71.0
Sample C Male 87.6
Sample D Male 76.7
Ventral hippocampus
nTPM: 72.6
Samples: 4

Max nTPM: 94.9
Min nTPM: 56.9
Sample A Female 94.9
Sample B Female 69.8
Sample C Male 68.9
Sample D Male 56.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.4
Samples: 4

Max nTPM: 176.1
Min nTPM: 111.1
Sample A Male 111.1
Sample B Male 124.6
Sample C Female 113.8
Sample D Female 176.1
Hippocampal formation
nTPM: 78.0
Samples: 4

Max nTPM: 93.9
Min nTPM: 67.8
Sample A Male 93.9
Sample B Male 80.8
Sample C Female 69.4
Sample D Female 67.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
74047444 Antisense, RP_051214_01_G06, Mouse strain C57BL/6J (56 days, male) 6.5
70276867 Antisense, RP_050531_01_E01, Mouse strain C57BL/6J (56 days, male) 2.2

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