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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
156.5
nTPM
FANTOM5:
338.5
Scaled Tags Per Million
Pig:
0.2
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
156.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 137.6
2301
Female, age 85, both hemispheres
156.5
2090
Male, age 80, both hemispheres
139.9
2188
Female, age 91, both hemispheres
138.0
1984
Male, age 76, both hemispheres
116.1
Dorsal cochlear nucleus nTPM: 145.4
2802
Male, age 74, right hemisphere
178.2
2187
Female, age 91, both hemispheres
150.2
2378
Male, age 80, both hemispheres
144.7
2058
Male, age 76, both hemispheres
131.3
2370
Male, age 61, both hemispheres
122.7
Dorsal tegmental nucleus nTPM: 143.0
2326
Male, age 74, both hemispheres
163.1
2358
Male, age 61, both hemispheres
145.7
2083
Male, age 80, both hemispheres
140.7
1936
Male, age 76, left hemisphere
122.6
Dorsolateral tegmental area nTPM: 129.3
2654
Male, age 80, both hemispheres
150.3
2751
Female, age 85, both hemispheres
138.1
2337
Male, age 61, both hemispheres
122.3
2360
Male, age 74, both hemispheres
119.9
2141
Male, age 76, both hemispheres
115.9
Kolliker-Fuse nucleus nTPM: 138.7
2315
Male, age 76, right hemisphere
157.7
2793
Female, age 91, left hemisphere
134.5
2163
Male, age 80, both hemispheres
123.8
Lateral lemniscal nuclei nTPM: 122.9
2453
Male, age 74, right hemisphere
137.9
2320
Female, age 91, left hemisphere
129.9
2169
Male, age 76, both hemispheres
126.3
2746
Female, age 85, left hemisphere
124.5
2036
Male, age 80, both hemispheres
95.9
Lateral parabrachial nucleus nTPM: 126.5
2792
Male, age 76, both hemispheres
152.2
2013
Male, age 80, both hemispheres
129.2
2139
Female, age 85, right hemisphere
116.3
2790
Male, age 61, both hemispheres
108.2
Lateral vestibular nucleus nTPM: 134.8
2311
Male, age 80, both hemispheres
149.9
2184
Male, age 76, both hemispheres
119.7
Locus coeruleus nTPM: 114.3
2317
Female, age 72, unknown
121.7
2788
Male, age 74, unknown
118.3
2014
Male, age 55, unknown
118.1
2720
Male, age 74, both hemispheres
115.0
2123
Female, age 91, both hemispheres
113.5
2162
Male, age 80, both hemispheres
107.6
1980
Male, age 76, both hemispheres
105.5
Medial parabrachial nucleus nTPM: 128.4
2170
Female, age 91, both hemispheres
149.7
2786
Male, age 76, both hemispheres
132.0
2463
Female, age 85, right hemisphere
128.2
2156
Male, age 61, both hemispheres
119.1
2854
Male, age 80, both hemispheres
113.2
Medial periolivary nuclei nTPM: 126.8
2063
Male, age 76, both hemispheres
139.8
2081
Male, age 80, both hemispheres
138.3
2458
Female, age 91, both hemispheres
131.1
2791
Male, age 74, right hemisphere
116.8
2171
Female, age 85, both hemispheres
108.1
Motor facial nucleus nTPM: 126.4
2126
Male, age 61, both hemispheres
133.9
2062
Male, age 76, both hemispheres
128.8
2327
Male, age 80, both hemispheres
127.6
2365
Male, age 74, right hemisphere
125.6
2795
Female, age 91, both hemispheres
125.6
2697
Female, age 85, both hemispheres
116.9
Motor trigeminal nucleus nTPM: 127.6
2321
Female, age 91, both hemispheres
136.3
2335
Male, age 61, both hemispheres
133.4
2309
Male, age 76, both hemispheres
130.1
2560
Male, age 74, both hemispheres
123.4
2079
Male, age 80, both hemispheres
114.8
Nuclei of the trapezoid body nTPM: 125.0
1983
Male, age 76, both hemispheres
133.0
2166
Male, age 80, both hemispheres
127.2
2159
Male, age 61, both hemispheres
125.1
2368
Female, age 91, both hemispheres
124.5
2735
Female, age 85, both hemispheres
115.2
Nucleus raphe magnus nTPM: 120.3
2459
Female, age 91, both hemispheres
130.0
2328
Male, age 80, both hemispheres
129.5
2455
Male, age 74, both hemispheres
129.2
2160
Male, age 61, both hemispheres
120.9
2051
Male, age 76, both hemispheres
113.4
2172
Female, age 85, both hemispheres
98.8
Paramedian reticular nucleus nTPM: 133.4
2052
Male, age 76, both hemispheres
149.5
2057
Male, age 80, both hemispheres
136.6
2313
Male, age 61, both hemispheres
134.7
2050
Female, age 85, both hemispheres
112.7
Pedunculopontine tegmental nucleus nTPM: 136.2
2334
Male, age 80, both hemispheres
147.5
2338
Male, age 61, both hemispheres
145.9
1921
Female, age 85, both hemispheres
115.1
Pontine nuclei nTPM: 126.2
2319
Female, age 91, both hemispheres
146.3
2454
Male, age 74, left hemisphere
136.8
1968
Male, age 76, left hemisphere
130.7
2727
Male, age 61, right hemisphere
128.5
2109
Female, age 72, unknown
128.4
2115
Male, age 80, left hemisphere
119.8
1863
Male, age 55, unknown
115.1
2787
Female, age 85, both hemispheres
104.1
Pontine raphe nucleus nTPM: 118.1
2853
Male, age 76, midline
118.9
2122
Female, age 85, midline
117.3
Posteroventral cochlear nucleus nTPM: 156.5
2341
Male, age 80, both hemispheres
190.7
2135
Female, age 91, both hemispheres
158.3
2371
Male, age 61, both hemispheres
152.5
2070
Male, age 76, both hemispheres
148.2
2752
Female, age 85, both hemispheres
133.0
Principal sensory trigeminal nucleus nTPM: 123.0
2324
Male, age 76, both hemispheres
134.7
2367
Female, age 91, left hemisphere
131.7
2158
Male, age 61, both hemispheres
120.7
2008
Male, age 80, left hemisphere
104.9
Reticular pontine nucleus, caudal nTPM: 131.2
2457
Female, age 91, both hemispheres
142.7
2559
Male, age 74, both hemispheres
130.2
2092
Male, age 76, both hemispheres
126.2
2332
Male, age 80, right hemisphere
125.6
Reticular pontine nucleus, oral nTPM: 130.3
2366
Female, age 91, both hemispheres
141.6
1939
Male, age 80, both hemispheres
138.6
2361
Male, age 74, both hemispheres
133.7
2167
Male, age 76, both hemispheres
123.3
2012
Female, age 85, both hemispheres
114.2
Reticulotegmental nucleus nTPM: 152.7
2322
Female, age 91, both hemispheres
172.3
2452
Male, age 74, both hemispheres
169.3
2333
Male, age 80, both hemispheres
140.4
2325
Male, age 76, both hemispheres
129.0
Spinal trigeminal nucleus, oral nTPM: 126.4
2164
Male, age 80, both hemispheres
132.8
1978
Male, age 76, both hemispheres
130.5
2737
Female, age 85, both hemispheres
116.0
Subcoeruleus area nTPM: 135.5
2451
Male, age 74, both hemispheres
164.0
2369
Female, age 85, left hemisphere
142.3
2323
Female, age 91, left hemisphere
132.4
1958
Male, age 80, both hemispheres
123.6
2089
Male, age 76, left hemisphere
115.0
Superior olive nTPM: 122.1
2020
Male, age 76, both hemispheres
131.3
2329
Male, age 80, right hemisphere
129.1
2561
Female, age 91, both hemispheres
123.9
2364
Male, age 74, right hemisphere
121.3
1875
Female, age 85, both hemispheres
105.0
Ventral periolivary nuclei nTPM: 118.1
2023
Male, age 76, both hemispheres
137.9
2165
Male, age 80, both hemispheres
118.8
2794
Female, age 91, left hemisphere
111.8
2130
Female, age 85, both hemispheres
103.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 123.2
2456
Female, age 91, both hemispheres
136.0
2161
Male, age 80, both hemispheres
131.1
2449
Male, age 74, both hemispheres
128.8
1959
Male, age 76, both hemispheres
117.7
2840
Female, age 85, both hemispheres
116.9
2359
Male, age 61, both hemispheres
108.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
