HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:3.2 nTPM
HPA Brain:21.9 nTPM
GTEx:3.2 nTPM
FANTOM5:5.8 Scaled Tags Per Million
Pig:19.7 nTPM
Mouse:114.0 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050060
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.9
Sample id Sample description nTPM
Hippocampus
nTPM: 16.7
2148 Female, age 91, left hemisphere 20.1
1898 Male, age 80, left hemisphere 19.3
1911 Female, age 85, right hemisphere 16.4
2621 Female, age 67, right hemisphere 15.2
1855 Male, age 76, left hemisphere 14.8
2529 Female, age 94, left hemisphere 14.7
Dentate gyrus
nTPM: 18.6
1927 Female, age 91, both hemispheres 31.3
2528 Male, age 74, both hemispheres 18.5
2010 Male, age 76, both hemispheres 18.3
2246 Female, age 85, both hemispheres 16.3
2531 Female, age 67, both hemispheres 15.3
2530 Female, age 94, left hemisphere 11.6
Entorhinal gyrus
nTPM: 17.8
2613 Female, age 94, left hemisphere 21.5
1938 Female, age 85, left hemisphere 19.7
2764 Male, age 80, right hemisphere 18.0
1787 Male, age 76, left hemisphere 17.1
2117 Female, age 91, right hemisphere 15.5
2686 Male, age 75, right hemisphere 15.2
Hippocampus, CA1
nTPM: 21.9
2749 Male, age 80, left hemisphere 30.2
2045 Male, age 76, both hemispheres 24.5
1873 Female, age 85, both hemispheres 20.5
2527 Male, age 74, both hemispheres 17.7
2082 Female, age 91, right hemisphere 16.5
Hippocampus, CA2
nTPM: 18.9
1963 Male, age 80, left hemisphere 22.0
1892 Male, age 76, both hemispheres 21.1
2249 Male, age 74, both hemispheres 21.1
2113 Female, age 91, right hemisphere 17.3
1940 Female, age 85, left hemisphere 16.0
2437 Female, age 94, left hemisphere 16.0
Hippocampus, CA3
nTPM: 19.7
2436 Male, age 74, both hemispheres 26.3
2137 Male, age 80, left hemisphere 23.0
2620 Female, age 94, left hemisphere 21.0
1867 Male, age 76, both hemispheres 18.2
1891 Female, age 85, both hemispheres 16.3
2861 Female, age 67, both hemispheres 13.1
Parahippocampal cortex
nTPM: 17.5
1850 Male, age 80, both hemispheres 21.6
2693 Female, age 94, both hemispheres 19.4
2245 Female, age 91, both hemispheres 18.9
1990 Female, age 91, right hemisphere 18.6
2532 Female, age 72, left hemisphere 17.7
1933 Female, age 85, both hemispheres 17.2
2250 Female, age 67, right hemisphere 16.9
2692 Male, age 74, both hemispheres 16.2
2622 Female, age 67, right hemisphere 14.5
2018 Male, age 76, both hemispheres 14.3
Perirhinal gyrus
nTPM: 20.1
1794 Male, age 80, right hemisphere 23.1
1847 Female, age 91, left hemisphere 22.8
2521 Female, age 94, right hemisphere 19.8
1841 Female, age 85, right hemisphere 19.7
2848 Male, age 76, right hemisphere 15.4
Subiculum
nTPM: 14.9
1977 Female, age 85, both hemispheres 16.8
2619 Male, age 74, both hemispheres 16.5
1901 Male, age 80, both hemispheres 15.1
2729 Female, age 91, right hemisphere 14.4
2042 Male, age 76, both hemispheres 13.8
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.2
Samples: 197

Max nTPM: 6.1
Min nTPM: 1.6
Std nTPM: 0.9
Median nTPM: 3.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 6.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 6.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 5.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 5.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 5.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 5.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 5.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 5.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 5.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 5.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 4.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.8
FF:10153-102I9 76 years, female 6.4
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.7
Pig sample Sample description nTPM
Subiculum
nTPM: 14.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 11.2
Sample A Female 19.2
Sample B Female 14.5
Sample C Male 13.6
Sample D Male 11.2
Dorsal hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 22.4
Min nTPM: 13.1
Sample A Female 22.4
Sample B Female 21.8
Sample C Male 13.1
Sample D Male 21.4
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.5
Sample A Female 18.0
Sample B Female 14.4
Sample C Male 15.6
Sample D Male 13.5
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 19.8
Min nTPM: 12.4
Sample A Female 16.5
Sample B Female 12.4
Sample C Male 18.0
Sample D Male 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.1
Samples: 4

Max nTPM: 141.5
Min nTPM: 98.6
Sample A Male 109.4
Sample B Male 106.7
Sample C Female 98.6
Sample D Female 141.5
Hippocampal formation
nTPM: 104.9
Samples: 4

Max nTPM: 126.1
Min nTPM: 90.5
Sample A Male 91.8
Sample B Male 111.1
Sample C Female 126.1
Sample D Female 90.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
75774651 Antisense, RP_060601_01_A08, Mouse strain C57BL/6J (56 days, male) 17.0

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