HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.1 nTPM
HPA Brain:25.6 nTPM
GTEx:12.1 nTPM
FANTOM5:20.8 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:9.4 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.6
Sample id Sample description nTPM
Hippocampus
nTPM: 22.4
2621 Female, age 67, right hemisphere 24.6
2148 Female, age 91, left hemisphere 24.2
1855 Male, age 76, left hemisphere 23.4
1898 Male, age 80, left hemisphere 23.4
2529 Female, age 94, left hemisphere 20.1
1911 Female, age 85, right hemisphere 19.0
Dentate gyrus
nTPM: 22.2
2530 Female, age 94, left hemisphere 26.5
2010 Male, age 76, both hemispheres 23.2
2531 Female, age 67, both hemispheres 22.4
2246 Female, age 85, both hemispheres 20.9
2528 Male, age 74, both hemispheres 20.4
1927 Female, age 91, both hemispheres 20.0
Entorhinal gyrus
nTPM: 25.6
2613 Female, age 94, left hemisphere 28.4
2686 Male, age 75, right hemisphere 26.1
2764 Male, age 80, right hemisphere 25.8
1938 Female, age 85, left hemisphere 24.8
1787 Male, age 76, left hemisphere 24.4
2117 Female, age 91, right hemisphere 24.0
Hippocampus, CA1
nTPM: 20.4
2082 Female, age 91, right hemisphere 20.9
2527 Male, age 74, both hemispheres 20.8
1873 Female, age 85, both hemispheres 20.2
2749 Male, age 80, left hemisphere 20.1
2045 Male, age 76, both hemispheres 19.9
Hippocampus, CA2
nTPM: 22.1
1940 Female, age 85, left hemisphere 23.9
1963 Male, age 80, left hemisphere 23.9
1892 Male, age 76, both hemispheres 22.1
2437 Female, age 94, left hemisphere 22.0
2113 Female, age 91, right hemisphere 20.8
2249 Male, age 74, both hemispheres 19.8
Hippocampus, CA3
nTPM: 23.7
2436 Male, age 74, both hemispheres 29.1
1867 Male, age 76, both hemispheres 24.1
2620 Female, age 94, left hemisphere 24.1
2861 Female, age 67, both hemispheres 23.3
2137 Male, age 80, left hemisphere 21.3
1891 Female, age 85, both hemispheres 20.4
Parahippocampal cortex
nTPM: 22.8
2622 Female, age 67, right hemisphere 24.8
2693 Female, age 94, both hemispheres 24.6
1990 Female, age 91, right hemisphere 23.8
2532 Female, age 72, left hemisphere 23.6
2250 Female, age 67, right hemisphere 23.2
2692 Male, age 74, both hemispheres 22.4
2018 Male, age 76, both hemispheres 22.2
2245 Female, age 91, both hemispheres 21.7
1933 Female, age 85, both hemispheres 21.6
1850 Male, age 80, both hemispheres 20.3
Perirhinal gyrus
nTPM: 22.8
1847 Female, age 91, left hemisphere 24.3
2521 Female, age 94, right hemisphere 24.0
1841 Female, age 85, right hemisphere 23.7
1794 Male, age 80, right hemisphere 23.1
2848 Male, age 76, right hemisphere 19.1
Subiculum
nTPM: 23.5
2619 Male, age 74, both hemispheres 24.9
2042 Male, age 76, both hemispheres 24.8
2729 Female, age 91, right hemisphere 23.4
1901 Male, age 80, both hemispheres 22.8
2438 Female, age 94, left hemisphere 22.6
1977 Female, age 85, both hemispheres 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 23.9
Min nTPM: 5.2
Std nTPM: 2.4
Median nTPM: 11.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 23.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 19.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 18.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 18.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 17.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 17.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 15.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 15.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 15.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.8
FF:10153-102I9 76 years, female 21.9
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.5
Pig sample Sample description nTPM
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 39.9
Min nTPM: 27.7
Sample A Female 39.9
Sample B Female 29.9
Sample C Male 32.4
Sample D Male 27.7
Dorsal hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 36.4
Min nTPM: 21.7
Sample A Female 36.4
Sample B Female 30.6
Sample C Male 30.3
Sample D Male 21.7
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 35.0
Min nTPM: 28.0
Sample A Female 34.0
Sample B Female 29.5
Sample C Male 35.0
Sample D Male 28.0
Ventral hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 42.8
Min nTPM: 23.0
Sample A Female 30.1
Sample B Female 23.0
Sample C Male 42.8
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 10.9
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 10.3
Sample C Female 10.3
Sample D Female 10.9
Hippocampal formation
nTPM: 8.3
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.0
Sample A Male 8.8
Sample B Male 7.6
Sample C Female 7.0
Sample D Female 9.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
70445395 Antisense, RP_050614_03_F11, Mouse strain C57BL/6J (56 days, male) 2.7

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