HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.5 nTPM
HPA Brain:18.8 nTPM
GTEx:5.5 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:18.7 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.8
Sample id Sample description nTPM
Hippocampus
nTPM: 17.5
1911 Female, age 85, right hemisphere 19.2
2529 Female, age 94, left hemisphere 19.1
2148 Female, age 91, left hemisphere 18.0
2621 Female, age 67, right hemisphere 17.3
1855 Male, age 76, left hemisphere 15.9
1898 Male, age 80, left hemisphere 15.5
Dentate gyrus
nTPM: 18.8
2531 Female, age 67, both hemispheres 22.9
2528 Male, age 74, both hemispheres 19.6
2010 Male, age 76, both hemispheres 19.2
2530 Female, age 94, left hemisphere 18.0
2246 Female, age 85, both hemispheres 17.9
1927 Female, age 91, both hemispheres 14.9
Entorhinal gyrus
nTPM: 16.0
2117 Female, age 91, right hemisphere 18.4
2686 Male, age 75, right hemisphere 17.5
2764 Male, age 80, right hemisphere 16.1
1787 Male, age 76, left hemisphere 16.0
1938 Female, age 85, left hemisphere 14.8
2613 Female, age 94, left hemisphere 13.3
Hippocampus, CA1
nTPM: 17.8
2045 Male, age 76, both hemispheres 21.6
2082 Female, age 91, right hemisphere 18.4
1873 Female, age 85, both hemispheres 17.8
2749 Male, age 80, left hemisphere 16.3
2527 Male, age 74, both hemispheres 15.0
Hippocampus, CA2
nTPM: 17.5
2437 Female, age 94, left hemisphere 19.4
2113 Female, age 91, right hemisphere 18.6
2249 Male, age 74, both hemispheres 18.0
1940 Female, age 85, left hemisphere 17.3
1963 Male, age 80, left hemisphere 16.6
1892 Male, age 76, both hemispheres 15.2
Hippocampus, CA3
nTPM: 18.5
2620 Female, age 94, left hemisphere 21.7
2861 Female, age 67, both hemispheres 20.4
2436 Male, age 74, both hemispheres 19.1
1891 Female, age 85, both hemispheres 18.2
1867 Male, age 76, both hemispheres 17.0
2137 Male, age 80, left hemisphere 14.7
Parahippocampal cortex
nTPM: 16.2
2018 Male, age 76, both hemispheres 21.8
2532 Female, age 72, left hemisphere 16.9
1933 Female, age 85, both hemispheres 16.2
2692 Male, age 74, both hemispheres 16.1
1850 Male, age 80, both hemispheres 15.8
2245 Female, age 91, both hemispheres 15.7
2250 Female, age 67, right hemisphere 15.6
1990 Female, age 91, right hemisphere 15.2
2693 Female, age 94, both hemispheres 15.0
2622 Female, age 67, right hemisphere 13.9
Perirhinal gyrus
nTPM: 14.3
1841 Female, age 85, right hemisphere 15.3
1794 Male, age 80, right hemisphere 14.5
2521 Female, age 94, right hemisphere 14.4
2848 Male, age 76, right hemisphere 14.1
1847 Female, age 91, left hemisphere 13.5
Subiculum
nTPM: 17.4
1901 Male, age 80, both hemispheres 19.4
2729 Female, age 91, right hemisphere 18.8
1977 Female, age 85, both hemispheres 17.6
2438 Female, age 94, left hemisphere 16.3
2042 Male, age 76, both hemispheres 16.2
2619 Male, age 74, both hemispheres 16.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.5
Samples: 197

Max nTPM: 11.6
Min nTPM: 2.0
Std nTPM: 1.4
Median nTPM: 5.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 11.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 10.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 9.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 9.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 9.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 8.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 8.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 8.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 8.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 8.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 7.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.8
FF:10153-102I9 76 years, female 20.0
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Subiculum
nTPM: 6.9
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.3
Sample A Female 6.2
Sample B Female 8.3
Sample C Male 7.7
Sample D Male 5.3
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 12.9
Min nTPM: 9.9
Sample A Female 11.6
Sample B Female 12.9
Sample C Male 10.5
Sample D Male 9.9
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.4
Sample A Female 6.2
Sample B Female 8.6
Sample C Male 7.6
Sample D Male 5.4
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 13.4
Min nTPM: 8.4
Sample A Female 8.4
Sample B Female 10.6
Sample C Male 13.4
Sample D Male 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 16.3
Min nTPM: 14.4
Sample A Male 15.0
Sample B Male 15.3
Sample C Female 16.3
Sample D Female 14.4
Hippocampal formation
nTPM: 18.7
Samples: 4

Max nTPM: 19.2
Min nTPM: 18.3
Sample A Male 19.2
Sample B Male 18.6
Sample C Female 18.3
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69079978 Antisense, RP_050324_01_A05, Mouse strain C57BL/6J (56 days, male) 2.2

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