HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:19.7 nTPM
HPA Brain:38.4 nTPM
GTEx:19.7 nTPM
FANTOM5:33.0 Scaled Tags Per Million
Pig:31.1 nTPM
Mouse:31.5 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042796
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.4
Sample id Sample description nTPM
Hippocampus
nTPM: 35.7
2148 Female, age 91, left hemisphere 38.7
1898 Male, age 80, left hemisphere 38.2
1855 Male, age 76, left hemisphere 37.8
2621 Female, age 67, right hemisphere 37.8
1911 Female, age 85, right hemisphere 31.9
2529 Female, age 94, left hemisphere 29.6
Dentate gyrus
nTPM: 34.1
2010 Male, age 76, both hemispheres 39.7
1927 Female, age 91, both hemispheres 34.9
2246 Female, age 85, both hemispheres 34.1
2531 Female, age 67, both hemispheres 33.5
2528 Male, age 74, both hemispheres 31.1
2530 Female, age 94, left hemisphere 31.1
Entorhinal gyrus
nTPM: 37.7
2613 Female, age 94, left hemisphere 44.3
2764 Male, age 80, right hemisphere 40.8
2686 Male, age 75, right hemisphere 37.1
1787 Male, age 76, left hemisphere 35.7
1938 Female, age 85, left hemisphere 35.7
2117 Female, age 91, right hemisphere 32.9
Hippocampus, CA1
nTPM: 38.4
2749 Male, age 80, left hemisphere 58.0
1873 Female, age 85, both hemispheres 36.3
2527 Male, age 74, both hemispheres 34.6
2045 Male, age 76, both hemispheres 33.1
2082 Female, age 91, right hemisphere 30.2
Hippocampus, CA2
nTPM: 34.8
1963 Male, age 80, left hemisphere 46.5
1892 Male, age 76, both hemispheres 36.0
1940 Female, age 85, left hemisphere 34.4
2113 Female, age 91, right hemisphere 34.0
2249 Male, age 74, both hemispheres 29.9
2437 Female, age 94, left hemisphere 28.0
Hippocampus, CA3
nTPM: 38.2
2137 Male, age 80, left hemisphere 48.4
2861 Female, age 67, both hemispheres 48.1
1867 Male, age 76, both hemispheres 37.1
2620 Female, age 94, left hemisphere 35.4
1891 Female, age 85, both hemispheres 30.5
2436 Male, age 74, both hemispheres 29.8
Parahippocampal cortex
nTPM: 36.8
2245 Female, age 91, both hemispheres 39.9
2622 Female, age 67, right hemisphere 38.8
2532 Female, age 72, left hemisphere 38.4
1850 Male, age 80, both hemispheres 37.2
1933 Female, age 85, both hemispheres 37.0
2693 Female, age 94, both hemispheres 37.0
2018 Male, age 76, both hemispheres 36.9
2692 Male, age 74, both hemispheres 35.8
2250 Female, age 67, right hemisphere 33.5
1990 Female, age 91, right hemisphere 33.2
Perirhinal gyrus
nTPM: 36.9
1794 Male, age 80, right hemisphere 41.1
1847 Female, age 91, left hemisphere 40.3
2521 Female, age 94, right hemisphere 37.6
1841 Female, age 85, right hemisphere 34.4
2848 Male, age 76, right hemisphere 30.9
Subiculum
nTPM: 32.2
2042 Male, age 76, both hemispheres 37.6
2619 Male, age 74, both hemispheres 36.0
1901 Male, age 80, both hemispheres 34.3
1977 Female, age 85, both hemispheres 32.1
2729 Female, age 91, right hemisphere 30.5
2438 Female, age 94, left hemisphere 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.7
Samples: 197

Max nTPM: 31.3
Min nTPM: 10.4
Std nTPM: 4.1
Median nTPM: 19.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 30.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 28.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 28.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 28.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 27.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 27.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 27.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 26.7
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 26.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.0
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 32.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.1
Pig sample Sample description nTPM
Subiculum
nTPM: 30.7
Samples: 4

Max nTPM: 36.2
Min nTPM: 26.5
Sample A Female 36.2
Sample B Female 29.9
Sample C Male 30.3
Sample D Male 26.5
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 32.8
Min nTPM: 25.3
Sample A Female 32.8
Sample B Female 31.6
Sample C Male 25.3
Sample D Male 25.9
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 31.8
Min nTPM: 28.8
Sample A Female 31.8
Sample B Female 29.0
Sample C Male 28.8
Sample D Male 29.2
Ventral hippocampus
nTPM: 31.1
Samples: 4

Max nTPM: 37.8
Min nTPM: 26.2
Sample A Female 28.7
Sample B Female 26.2
Sample C Male 37.8
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.4
Samples: 4

Max nTPM: 32.0
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 32.0
Sample C Female 31.1
Sample D Female 32.0
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 32.0
Min nTPM: 26.3
Sample A Male 32.0
Sample B Male 27.1
Sample C Female 27.3
Sample D Female 26.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69855160 Antisense, RP_050324_04_H06, Mouse strain C57BL/6J (56 days, male) 1.3

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