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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
34.1
nTPM
HPA Brain:
66.9
nTPM
GTEx:
34.1
nTPM
FANTOM5:
0.0
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA026750
Glial cells
Not detected
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
66.9
Sample id
Sample description
nTPM
Hippocampus nTPM: 56.6
2148
Female, age 91, left hemisphere
68.9
1911
Female, age 85, right hemisphere
64.5
2621
Female, age 67, right hemisphere
60.6
1855
Male, age 76, left hemisphere
55.2
2529
Female, age 94, left hemisphere
53.1
1898
Male, age 80, left hemisphere
37.2
Dentate gyrus nTPM: 60.1
2531
Female, age 67, both hemispheres
78.7
2246
Female, age 85, both hemispheres
63.5
2528
Male, age 74, both hemispheres
59.7
1927
Female, age 91, both hemispheres
59.1
2530
Female, age 94, left hemisphere
50.4
2010
Male, age 76, both hemispheres
49.1
Entorhinal gyrus nTPM: 56.8
2686
Male, age 75, right hemisphere
71.6
2613
Female, age 94, left hemisphere
68.7
2764
Male, age 80, right hemisphere
61.2
1787
Male, age 76, left hemisphere
51.6
2117
Female, age 91, right hemisphere
44.4
1938
Female, age 85, left hemisphere
43.1
Hippocampus, CA1 nTPM: 55.0
2082
Female, age 91, right hemisphere
65.7
2045
Male, age 76, both hemispheres
63.3
2527
Male, age 74, both hemispheres
56.8
1873
Female, age 85, both hemispheres
54.4
2749
Male, age 80, left hemisphere
35.1
Hippocampus, CA2 nTPM: 53.7
2113
Female, age 91, right hemisphere
60.1
1940
Female, age 85, left hemisphere
59.3
2249
Male, age 74, both hemispheres
54.1
2437
Female, age 94, left hemisphere
53.9
1892
Male, age 76, both hemispheres
49.3
1963
Male, age 80, left hemisphere
45.4
Hippocampus, CA3 nTPM: 66.9
2436
Male, age 74, both hemispheres
86.8
2620
Female, age 94, left hemisphere
80.8
2861
Female, age 67, both hemispheres
71.3
1891
Female, age 85, both hemispheres
56.7
1867
Male, age 76, both hemispheres
55.5
2137
Male, age 80, left hemisphere
49.9
Parahippocampal cortex nTPM: 58.4
2622
Female, age 67, right hemisphere
87.3
2693
Female, age 94, both hemispheres
64.8
2018
Male, age 76, both hemispheres
60.8
2692
Male, age 74, both hemispheres
60.2
2532
Female, age 72, left hemisphere
57.5
2250
Female, age 67, right hemisphere
54.0
1990
Female, age 91, right hemisphere
53.5
2245
Female, age 91, both hemispheres
50.9
1850
Male, age 80, both hemispheres
48.1
1933
Female, age 85, both hemispheres
46.5
Perirhinal gyrus nTPM: 48.9
2848
Male, age 76, right hemisphere
53.8
1841
Female, age 85, right hemisphere
50.0
2521
Female, age 94, right hemisphere
48.0
1794
Male, age 80, right hemisphere
47.4
1847
Female, age 91, left hemisphere
45.6
Subiculum nTPM: 56.2
2729
Female, age 91, right hemisphere
68.9
2042
Male, age 76, both hemispheres
61.3
2619
Male, age 74, both hemispheres
61.0
2438
Female, age 94, left hemisphere
50.4
1901
Male, age 80, both hemispheres
48.8
1977
Female, age 85, both hemispheres
47.0
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
34.1
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 34.1
Samples: 197
Max nTPM: 104.5
Min nTPM: 3.6
Std nTPM: 16.0
Median nTPM: 30.1
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
104.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
97.0
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
93.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
74.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
71.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
70.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
64.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
64.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
62.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
61.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
61.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
60.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
60.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
59.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
59.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
58.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
58.6
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
58.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
57.4
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
56.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
56.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
54.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
52.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
52.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
52.2
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
52.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
51.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
51.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
50.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
50.8
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
50.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
50.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
49.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
49.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
48.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
48.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
48.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
48.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
48.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
47.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
46.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
45.6
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
44.8
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
44.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
43.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
43.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
43.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
43.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
42.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
42.6
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
42.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
41.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
41.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
40.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
39.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
39.5
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
39.3
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
39.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
38.8
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
38.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
38.6
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
38.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
38.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
38.5
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
38.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
38.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
37.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
37.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
37.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
37.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
37.4
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
37.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
36.6
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
36.5
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
36.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
36.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
35.7
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
35.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
34.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
34.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
34.4
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
34.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
34.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
34.1
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
34.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
33.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
32.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
32.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
32.7
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
32.6
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
32.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
31.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
31.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
31.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
30.8
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
30.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
30.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
30.4
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
30.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
29.8
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
29.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
29.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
29.2
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
28.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
28.7
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
28.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
28.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
27.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
27.8
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
27.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
27.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
27.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
27.3
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
27.2
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
27.1
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
27.0
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
27.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
26.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
26.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
26.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
26.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
26.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
26.1
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
26.1
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
26.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
25.9
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
25.8
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
25.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
25.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
25.1
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
25.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
24.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
24.8
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
24.8
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
24.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
24.4
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
23.9
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
23.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
23.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
23.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
23.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
22.9
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
22.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
22.6
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
22.6
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
22.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
22.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
22.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
22.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
22.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
21.9
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
21.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
21.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
21.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
21.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
20.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
20.8
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
20.6
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
20.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
20.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
20.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
20.5
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
20.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
20.0
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
19.7
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
19.5
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
19.5
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
19.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
19.2
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
19.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
19.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
19.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
18.9
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
18.9
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
18.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
18.7
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
18.6
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
18.5
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
18.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
18.2
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
18.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
17.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
17.5
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
17.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
17.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
17.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
16.9
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
16.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
16.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
16.1
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
16.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
14.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
11.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
9.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
9.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
6.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
3.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.