HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1.5 nTPM
HPA Brain:45.6 nTPM
GTEx:1.5 nTPM
FANTOM5:35.8 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:18.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046443
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.6
Sample id Sample description nTPM
Hippocampus
nTPM: 41.5
2148 Female, age 91, left hemisphere 47.3
1911 Female, age 85, right hemisphere 45.4
1855 Male, age 76, left hemisphere 42.5
2621 Female, age 67, right hemisphere 42.0
2529 Female, age 94, left hemisphere 37.3
1898 Male, age 80, left hemisphere 34.3
Dentate gyrus
nTPM: 40.7
1927 Female, age 91, both hemispheres 46.6
2531 Female, age 67, both hemispheres 46.6
2246 Female, age 85, both hemispheres 42.8
2528 Male, age 74, both hemispheres 38.1
2010 Male, age 76, both hemispheres 36.2
2530 Female, age 94, left hemisphere 34.0
Entorhinal gyrus
nTPM: 42.4
2613 Female, age 94, left hemisphere 52.4
1938 Female, age 85, left hemisphere 44.5
2686 Male, age 75, right hemisphere 43.8
1787 Male, age 76, left hemisphere 38.9
2764 Male, age 80, right hemisphere 38.3
2117 Female, age 91, right hemisphere 36.8
Hippocampus, CA1
nTPM: 42.4
2045 Male, age 76, both hemispheres 45.6
1873 Female, age 85, both hemispheres 45.4
2082 Female, age 91, right hemisphere 41.1
2749 Male, age 80, left hemisphere 40.5
2527 Male, age 74, both hemispheres 39.3
Hippocampus, CA2
nTPM: 39.3
2113 Female, age 91, right hemisphere 42.2
1940 Female, age 85, left hemisphere 41.9
2437 Female, age 94, left hemisphere 38.9
2249 Male, age 74, both hemispheres 38.5
1892 Male, age 76, both hemispheres 38.3
1963 Male, age 80, left hemisphere 36.0
Hippocampus, CA3
nTPM: 43.6
2620 Female, age 94, left hemisphere 52.5
2137 Male, age 80, left hemisphere 48.3
1891 Female, age 85, both hemispheres 42.2
2861 Female, age 67, both hemispheres 42.0
2436 Male, age 74, both hemispheres 40.9
1867 Male, age 76, both hemispheres 35.5
Parahippocampal cortex
nTPM: 45.6
2622 Female, age 67, right hemisphere 53.0
2693 Female, age 94, both hemispheres 52.7
1933 Female, age 85, both hemispheres 47.7
2245 Female, age 91, both hemispheres 46.7
2250 Female, age 67, right hemisphere 46.2
1850 Male, age 80, both hemispheres 45.5
2532 Female, age 72, left hemisphere 45.2
2692 Male, age 74, both hemispheres 43.7
1990 Female, age 91, right hemisphere 39.2
2018 Male, age 76, both hemispheres 36.2
Perirhinal gyrus
nTPM: 45.1
2848 Male, age 76, right hemisphere 50.0
1841 Female, age 85, right hemisphere 48.0
2521 Female, age 94, right hemisphere 46.7
1847 Female, age 91, left hemisphere 41.2
1794 Male, age 80, right hemisphere 39.4
Subiculum
nTPM: 40.6
2438 Female, age 94, left hemisphere 46.8
2729 Female, age 91, right hemisphere 41.5
1901 Male, age 80, both hemispheres 40.9
2619 Male, age 74, both hemispheres 39.5
1977 Female, age 85, both hemispheres 38.8
2042 Male, age 76, both hemispheres 36.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.5
Samples: 197

Max nTPM: 2.5
Min nTPM: 0.6
Std nTPM: 0.3
Median nTPM: 1.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 2.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 2.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 2.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 2.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 2.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 2.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 2.2
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 2.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 2.1
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 2.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 2.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.8
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 22.8
Min nTPM: 16.1
Sample A Female 22.8
Sample B Female 18.0
Sample C Male 16.1
Sample D Male 18.1
Dorsal hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 15.8
Sample A Female 18.1
Sample B Female 15.8
Sample C Male 16.1
Sample D Male 16.0
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 19.6
Min nTPM: 17.7
Sample A Female 19.2
Sample B Female 19.6
Sample C Male 17.7
Sample D Male 18.1
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.0
Sample A Female 18.6
Sample B Female 16.6
Sample C Male 13.0
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 20.6
Min nTPM: 17.8
Sample A Male 20.6
Sample B Male 18.6
Sample C Female 17.8
Sample D Female 17.8
Hippocampal formation
nTPM: 18.7
Samples: 4

Max nTPM: 23.0
Min nTPM: 15.3
Sample A Male 23.0
Sample B Male 19.6
Sample C Female 15.3
Sample D Female 16.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
583846 Antisense, RP_040831_01_A09, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org