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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
193.9
nTPM
FANTOM5:
602.7
Scaled Tags Per Million
Pig:
488.8
nTPM
Allen mouse:
2.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
193.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 182.1
2188
Female, age 91, both hemispheres
234.3
2301
Female, age 85, both hemispheres
197.3
2090
Male, age 80, both hemispheres
169.2
1984
Male, age 76, both hemispheres
127.6
Dorsal cochlear nucleus nTPM: 182.6
2378
Male, age 80, both hemispheres
223.0
2187
Female, age 91, both hemispheres
188.9
2802
Male, age 74, right hemisphere
187.2
2058
Male, age 76, both hemispheres
165.5
2370
Male, age 61, both hemispheres
148.5
Dorsal tegmental nucleus nTPM: 160.8
2326
Male, age 74, both hemispheres
176.8
1936
Male, age 76, left hemisphere
171.4
2083
Male, age 80, both hemispheres
156.2
2358
Male, age 61, both hemispheres
138.7
Dorsolateral tegmental area nTPM: 152.3
2751
Female, age 85, both hemispheres
212.5
2654
Male, age 80, both hemispheres
168.8
2337
Male, age 61, both hemispheres
129.7
2360
Male, age 74, both hemispheres
125.6
2141
Male, age 76, both hemispheres
124.8
Kolliker-Fuse nucleus nTPM: 179.1
2793
Female, age 91, left hemisphere
207.1
2163
Male, age 80, both hemispheres
165.2
2315
Male, age 76, right hemisphere
165.1
Lateral lemniscal nuclei nTPM: 170.6
2036
Male, age 80, both hemispheres
187.9
2320
Female, age 91, left hemisphere
178.2
2746
Female, age 85, left hemisphere
176.0
2453
Male, age 74, right hemisphere
155.4
2169
Male, age 76, both hemispheres
155.2
Lateral parabrachial nucleus nTPM: 184.6
2792
Male, age 76, both hemispheres
246.0
2013
Male, age 80, both hemispheres
186.9
2790
Male, age 61, both hemispheres
157.2
2139
Female, age 85, right hemisphere
148.2
Lateral vestibular nucleus nTPM: 160.3
2184
Male, age 76, both hemispheres
160.9
2311
Male, age 80, both hemispheres
159.7
Locus coeruleus nTPM: 151.5
2788
Male, age 74, unknown
188.2
2720
Male, age 74, both hemispheres
165.0
2162
Male, age 80, both hemispheres
160.5
2014
Male, age 55, unknown
156.7
1980
Male, age 76, both hemispheres
131.7
2123
Female, age 91, both hemispheres
131.1
2317
Female, age 72, unknown
127.5
Medial parabrachial nucleus nTPM: 165.7
2854
Male, age 80, both hemispheres
179.3
2170
Female, age 91, both hemispheres
175.3
2786
Male, age 76, both hemispheres
168.8
2463
Female, age 85, right hemisphere
154.6
2156
Male, age 61, both hemispheres
150.3
Medial periolivary nuclei nTPM: 168.4
2081
Male, age 80, both hemispheres
176.8
2791
Male, age 74, right hemisphere
173.1
2063
Male, age 76, both hemispheres
169.7
2171
Female, age 85, both hemispheres
162.1
2458
Female, age 91, both hemispheres
160.4
Motor facial nucleus nTPM: 176.0
2697
Female, age 85, both hemispheres
215.4
2365
Male, age 74, right hemisphere
185.5
2795
Female, age 91, both hemispheres
170.8
2327
Male, age 80, both hemispheres
169.9
2062
Male, age 76, both hemispheres
158.0
2126
Male, age 61, both hemispheres
156.3
Motor trigeminal nucleus nTPM: 152.3
2079
Male, age 80, both hemispheres
159.0
2560
Male, age 74, both hemispheres
155.7
2309
Male, age 76, both hemispheres
153.6
2321
Female, age 91, both hemispheres
150.1
2335
Male, age 61, both hemispheres
143.2
Nuclei of the trapezoid body nTPM: 164.5
2368
Female, age 91, both hemispheres
178.6
2166
Male, age 80, both hemispheres
177.5
1983
Male, age 76, both hemispheres
172.7
2159
Male, age 61, both hemispheres
159.9
2735
Female, age 85, both hemispheres
134.1
Nucleus raphe magnus nTPM: 164.7
2051
Male, age 76, both hemispheres
189.5
2328
Male, age 80, both hemispheres
185.8
2459
Female, age 91, both hemispheres
173.1
2455
Male, age 74, both hemispheres
165.6
2172
Female, age 85, both hemispheres
139.8
2160
Male, age 61, both hemispheres
134.4
Paramedian reticular nucleus nTPM: 193.9
2052
Male, age 76, both hemispheres
234.3
2313
Male, age 61, both hemispheres
187.0
2050
Female, age 85, both hemispheres
181.0
2057
Male, age 80, both hemispheres
173.3
Pedunculopontine tegmental nucleus nTPM: 171.9
2334
Male, age 80, both hemispheres
177.5
2338
Male, age 61, both hemispheres
169.3
1921
Female, age 85, both hemispheres
168.7
Pontine nuclei nTPM: 172.6
2319
Female, age 91, both hemispheres
228.6
2454
Male, age 74, left hemisphere
211.9
1863
Male, age 55, unknown
198.4
1968
Male, age 76, left hemisphere
174.5
2109
Female, age 72, unknown
153.7
2727
Male, age 61, right hemisphere
153.3
2115
Male, age 80, left hemisphere
140.3
2787
Female, age 85, both hemispheres
119.9
Pontine raphe nucleus nTPM: 160.7
2122
Female, age 85, midline
164.7
2853
Male, age 76, midline
156.8
Posteroventral cochlear nucleus nTPM: 192.0
2135
Female, age 91, both hemispheres
251.8
2341
Male, age 80, both hemispheres
228.6
2070
Male, age 76, both hemispheres
163.7
2371
Male, age 61, both hemispheres
159.0
2752
Female, age 85, both hemispheres
156.6
Principal sensory trigeminal nucleus nTPM: 164.3
2367
Female, age 91, left hemisphere
218.6
2324
Male, age 76, both hemispheres
158.6
2008
Male, age 80, left hemisphere
153.4
2158
Male, age 61, both hemispheres
126.6
Reticular pontine nucleus, caudal nTPM: 176.9
2457
Female, age 91, both hemispheres
199.3
2559
Male, age 74, both hemispheres
191.3
2092
Male, age 76, both hemispheres
170.6
2332
Male, age 80, right hemisphere
146.4
Reticular pontine nucleus, oral nTPM: 191.6
2366
Female, age 91, both hemispheres
217.4
1939
Male, age 80, both hemispheres
200.0
2012
Female, age 85, both hemispheres
181.1
2361
Male, age 74, both hemispheres
179.9
2167
Male, age 76, both hemispheres
179.4
Reticulotegmental nucleus nTPM: 165.1
2333
Male, age 80, both hemispheres
173.5
2322
Female, age 91, both hemispheres
166.0
2452
Male, age 74, both hemispheres
161.9
2325
Male, age 76, both hemispheres
158.9
Spinal trigeminal nucleus, oral nTPM: 166.3
1978
Male, age 76, both hemispheres
168.8
2164
Male, age 80, both hemispheres
167.5
2737
Female, age 85, both hemispheres
162.8
Subcoeruleus area nTPM: 182.8
2369
Female, age 85, left hemisphere
246.7
1958
Male, age 80, both hemispheres
177.5
2323
Female, age 91, left hemisphere
167.4
2451
Male, age 74, both hemispheres
165.2
2089
Male, age 76, left hemisphere
157.1
Superior olive nTPM: 172.7
2020
Male, age 76, both hemispheres
196.7
1875
Female, age 85, both hemispheres
185.3
2329
Male, age 80, right hemisphere
177.3
2561
Female, age 91, both hemispheres
155.9
2364
Male, age 74, right hemisphere
148.1
Ventral periolivary nuclei nTPM: 172.8
2023
Male, age 76, both hemispheres
213.5
2165
Male, age 80, both hemispheres
176.2
2794
Female, age 91, left hemisphere
159.6
2130
Female, age 85, both hemispheres
141.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 181.8
2840
Female, age 85, both hemispheres
208.1
2359
Male, age 61, both hemispheres
206.0
1959
Male, age 76, both hemispheres
187.1
2161
Male, age 80, both hemispheres
173.3
2449
Male, age 74, both hemispheres
171.2
2456
Female, age 91, both hemispheres
145.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
488.8
Pig sample
Sample description
nTPM
Pons nTPM: 488.8
Samples: 4
Max nTPM: 569.6
Min nTPM: 379.4
Sample A
Female
465.6
Sample B
Female
379.4
Sample C
Male
540.7
Sample D
Male
569.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
