HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.2 nTPM
HPA Brain:11.6 nTPM
GTEx:13.2 nTPM
FANTOM5:13.4 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:16.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.6
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1855 Male, age 76, left hemisphere 14.0
1898 Male, age 80, left hemisphere 10.3
2529 Female, age 94, left hemisphere 10.0
2621 Female, age 67, right hemisphere 10.0
1911 Female, age 85, right hemisphere 9.0
2148 Female, age 91, left hemisphere 8.9
Dentate gyrus
nTPM: 10.1
2010 Male, age 76, both hemispheres 13.9
2528 Male, age 74, both hemispheres 11.9
2530 Female, age 94, left hemisphere 9.9
2246 Female, age 85, both hemispheres 9.3
1927 Female, age 91, both hemispheres 9.1
2531 Female, age 67, both hemispheres 6.6
Entorhinal gyrus
nTPM: 8.2
2117 Female, age 91, right hemisphere 10.7
2764 Male, age 80, right hemisphere 9.4
1938 Female, age 85, left hemisphere 8.0
1787 Male, age 76, left hemisphere 7.8
2613 Female, age 94, left hemisphere 7.1
2686 Male, age 75, right hemisphere 5.9
Hippocampus, CA1
nTPM: 10.3
2045 Male, age 76, both hemispheres 12.2
2527 Male, age 74, both hemispheres 10.5
2749 Male, age 80, left hemisphere 10.0
1873 Female, age 85, both hemispheres 9.3
2082 Female, age 91, right hemisphere 9.2
Hippocampus, CA2
nTPM: 11.4
2249 Male, age 74, both hemispheres 14.4
1963 Male, age 80, left hemisphere 12.3
2437 Female, age 94, left hemisphere 11.2
1892 Male, age 76, both hemispheres 11.1
2113 Female, age 91, right hemisphere 10.3
1940 Female, age 85, left hemisphere 9.2
Hippocampus, CA3
nTPM: 11.6
2436 Male, age 74, both hemispheres 16.1
1867 Male, age 76, both hemispheres 13.4
1891 Female, age 85, both hemispheres 11.6
2620 Female, age 94, left hemisphere 10.8
2137 Male, age 80, left hemisphere 9.8
2861 Female, age 67, both hemispheres 7.8
Parahippocampal cortex
nTPM: 9.7
2018 Male, age 76, both hemispheres 12.1
1933 Female, age 85, both hemispheres 12.0
2532 Female, age 72, left hemisphere 11.3
1990 Female, age 91, right hemisphere 10.4
2250 Female, age 67, right hemisphere 9.6
2693 Female, age 94, both hemispheres 9.6
1850 Male, age 80, both hemispheres 8.6
2245 Female, age 91, both hemispheres 8.6
2692 Male, age 74, both hemispheres 8.4
2622 Female, age 67, right hemisphere 6.7
Perirhinal gyrus
nTPM: 8.1
1841 Female, age 85, right hemisphere 8.8
2521 Female, age 94, right hemisphere 8.4
1847 Female, age 91, left hemisphere 8.1
2848 Male, age 76, right hemisphere 8.0
1794 Male, age 80, right hemisphere 7.3
Subiculum
nTPM: 11.1
2042 Male, age 76, both hemispheres 15.3
1901 Male, age 80, both hemispheres 12.0
2729 Female, age 91, right hemisphere 10.1
2438 Female, age 94, left hemisphere 10.0
1977 Female, age 85, both hemispheres 9.9
2619 Male, age 74, both hemispheres 9.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 41.9
Min nTPM: 5.0
Std nTPM: 4.5
Median nTPM: 12.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 41.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 33.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 28.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 24.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 23.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 23.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 22.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 21.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 21.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 21.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.4
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 10.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Subiculum
nTPM: 20.2
Samples: 4

Max nTPM: 25.5
Min nTPM: 17.2
Sample A Female 25.5
Sample B Female 18.2
Sample C Male 17.2
Sample D Male 19.8
Dorsal hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 32.7
Min nTPM: 18.4
Sample A Female 32.7
Sample B Female 23.4
Sample C Male 25.9
Sample D Male 18.4
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.3
Sample A Female 21.0
Sample B Female 20.6
Sample C Male 18.4
Sample D Male 14.3
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 23.6
Min nTPM: 17.2
Sample A Female 22.5
Sample B Female 17.2
Sample C Male 23.6
Sample D Male 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.8
Sample A Male 10.8
Sample B Male 10.8
Sample C Female 14.4
Sample D Female 11.4
Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 20.0
Min nTPM: 13.9
Sample A Male 14.4
Sample B Male 13.9
Sample C Female 17.1
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763837 Antisense, RP_050921_02_G01, Mouse strain C57BL/6J (56 days, male) 0.0

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