HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:131.8 nTPM
HPA Brain:189.5 nTPM
GTEx:131.8 nTPM
FANTOM5:235.5 Scaled Tags Per Million
Pig:142.7 nTPM
Mouse:321.9 nTPM
Allen mouse:22.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054102
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 189.5
Sample id Sample description nTPM
Hippocampus
nTPM: 141.6
1898 Male, age 80, left hemisphere 171.2
2621 Female, age 67, right hemisphere 157.5
1855 Male, age 76, left hemisphere 149.2
2529 Female, age 94, left hemisphere 130.8
1911 Female, age 85, right hemisphere 128.6
2148 Female, age 91, left hemisphere 112.2
Dentate gyrus
nTPM: 143.2
2010 Male, age 76, both hemispheres 179.7
1927 Female, age 91, both hemispheres 166.3
2246 Female, age 85, both hemispheres 148.6
2531 Female, age 67, both hemispheres 126.2
2530 Female, age 94, left hemisphere 123.9
2528 Male, age 74, both hemispheres 114.3
Entorhinal gyrus
nTPM: 142.0
1938 Female, age 85, left hemisphere 170.5
2764 Male, age 80, right hemisphere 165.7
1787 Male, age 76, left hemisphere 144.2
2613 Female, age 94, left hemisphere 129.8
2686 Male, age 75, right hemisphere 125.7
2117 Female, age 91, right hemisphere 116.0
Hippocampus, CA1
nTPM: 171.2
2749 Male, age 80, left hemisphere 255.9
1873 Female, age 85, both hemispheres 162.6
2527 Male, age 74, both hemispheres 160.2
2045 Male, age 76, both hemispheres 156.8
2082 Female, age 91, right hemisphere 120.4
Hippocampus, CA2
nTPM: 147.0
1892 Male, age 76, both hemispheres 192.6
2249 Male, age 74, both hemispheres 158.2
1963 Male, age 80, left hemisphere 155.5
1940 Female, age 85, left hemisphere 133.2
2437 Female, age 94, left hemisphere 125.9
2113 Female, age 91, right hemisphere 116.6
Hippocampus, CA3
nTPM: 163.6
2137 Male, age 80, left hemisphere 226.3
2436 Male, age 74, both hemispheres 195.1
1867 Male, age 76, both hemispheres 188.0
1891 Female, age 85, both hemispheres 137.3
2620 Female, age 94, left hemisphere 128.9
2861 Female, age 67, both hemispheres 105.9
Parahippocampal cortex
nTPM: 157.2
1850 Male, age 80, both hemispheres 200.5
2245 Female, age 91, both hemispheres 183.9
1933 Female, age 85, both hemispheres 176.2
2532 Female, age 72, left hemisphere 172.9
2018 Male, age 76, both hemispheres 153.7
2250 Female, age 67, right hemisphere 152.3
1990 Female, age 91, right hemisphere 152.0
2693 Female, age 94, both hemispheres 149.2
2622 Female, age 67, right hemisphere 119.3
2692 Male, age 74, both hemispheres 112.4
Perirhinal gyrus
nTPM: 189.5
1841 Female, age 85, right hemisphere 214.2
1847 Female, age 91, left hemisphere 202.3
1794 Male, age 80, right hemisphere 193.6
2521 Female, age 94, right hemisphere 169.0
2848 Male, age 76, right hemisphere 168.5
Subiculum
nTPM: 140.3
1901 Male, age 80, both hemispheres 167.7
1977 Female, age 85, both hemispheres 164.2
2042 Male, age 76, both hemispheres 158.7
2438 Female, age 94, left hemisphere 139.3
2619 Male, age 74, both hemispheres 117.9
2729 Female, age 91, right hemisphere 94.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 131.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 131.8
Samples: 197

Max nTPM: 249.6
Min nTPM: 81.2
Std nTPM: 26.6
Median nTPM: 128.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 249.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 226.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 209.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 207.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 202.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 192.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 189.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 178.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 177.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 176.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 175.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 235.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 235.5
FF:10169-103B7 60 years, female 284.5
FF:10153-102I9 76 years, female 186.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 142.7
Pig sample Sample description nTPM
Subiculum
nTPM: 142.7
Samples: 4

Max nTPM: 173.0
Min nTPM: 127.7
Sample A Female 173.0
Sample B Female 135.2
Sample C Male 135.0
Sample D Male 127.7
Dorsal hippocampus
nTPM: 132.3
Samples: 4

Max nTPM: 154.2
Min nTPM: 104.2
Sample A Female 154.2
Sample B Female 137.2
Sample C Male 133.6
Sample D Male 104.2
Entorhinal cortex
nTPM: 130.4
Samples: 4

Max nTPM: 143.3
Min nTPM: 119.9
Sample A Female 128.4
Sample B Female 143.3
Sample C Male 130.0
Sample D Male 119.9
Ventral hippocampus
nTPM: 132.0
Samples: 4

Max nTPM: 149.4
Min nTPM: 111.3
Sample A Female 149.4
Sample B Female 111.3
Sample C Male 141.0
Sample D Male 126.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 321.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 304.9
Samples: 4

Max nTPM: 335.9
Min nTPM: 260.4
Sample A Male 260.4
Sample B Male 300.8
Sample C Female 322.6
Sample D Female 335.9
Hippocampal formation
nTPM: 321.9
Samples: 4

Max nTPM: 373.3
Min nTPM: 293.6
Sample A Male 373.3
Sample B Male 304.3
Sample C Female 293.6
Sample D Female 316.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.5
70946634 Antisense, RP_050505_01_F06, Mouse strain C57BL/6J (56 days, male) 22.5

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