HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.5 nTPM
HPA Brain:34.7 nTPM
GTEx:16.5 nTPM
FANTOM5:57.4 Scaled Tags Per Million
Pig:34.8 nTPM
Mouse:44.1 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038059Antibody HPA038060Antibody CAB002140
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1898 Male, age 80, left hemisphere 39.8
2621 Female, age 67, right hemisphere 29.5
1855 Male, age 76, left hemisphere 29.0
1911 Female, age 85, right hemisphere 28.9
2529 Female, age 94, left hemisphere 28.1
2148 Female, age 91, left hemisphere 23.2
Dentate gyrus
nTPM: 29.6
2010 Male, age 76, both hemispheres 34.7
2530 Female, age 94, left hemisphere 30.8
1927 Female, age 91, both hemispheres 30.5
2246 Female, age 85, both hemispheres 29.3
2528 Male, age 74, both hemispheres 27.9
2531 Female, age 67, both hemispheres 24.5
Entorhinal gyrus
nTPM: 29.6
1938 Female, age 85, left hemisphere 34.5
2764 Male, age 80, right hemisphere 32.0
2117 Female, age 91, right hemisphere 31.9
1787 Male, age 76, left hemisphere 30.3
2613 Female, age 94, left hemisphere 24.8
2686 Male, age 75, right hemisphere 24.2
Hippocampus, CA1
nTPM: 29.8
2749 Male, age 80, left hemisphere 39.6
1873 Female, age 85, both hemispheres 32.4
2527 Male, age 74, both hemispheres 29.2
2082 Female, age 91, right hemisphere 25.4
2045 Male, age 76, both hemispheres 22.4
Hippocampus, CA2
nTPM: 31.6
1892 Male, age 76, both hemispheres 39.4
1963 Male, age 80, left hemisphere 35.1
2249 Male, age 74, both hemispheres 34.2
2113 Female, age 91, right hemisphere 27.4
1940 Female, age 85, left hemisphere 26.8
2437 Female, age 94, left hemisphere 26.8
Hippocampus, CA3
nTPM: 27.6
1891 Female, age 85, both hemispheres 33.5
1867 Male, age 76, both hemispheres 32.7
2137 Male, age 80, left hemisphere 31.4
2436 Male, age 74, both hemispheres 29.1
2620 Female, age 94, left hemisphere 21.5
2861 Female, age 67, both hemispheres 17.5
Parahippocampal cortex
nTPM: 30.0
1850 Male, age 80, both hemispheres 42.2
1990 Female, age 91, right hemisphere 34.9
1933 Female, age 85, both hemispheres 30.4
2532 Female, age 72, left hemisphere 30.4
2018 Male, age 76, both hemispheres 29.4
2250 Female, age 67, right hemisphere 29.3
2245 Female, age 91, both hemispheres 29.1
2693 Female, age 94, both hemispheres 28.5
2692 Male, age 74, both hemispheres 26.7
2622 Female, age 67, right hemisphere 19.2
Perirhinal gyrus
nTPM: 34.7
1847 Female, age 91, left hemisphere 37.5
1794 Male, age 80, right hemisphere 37.4
1841 Female, age 85, right hemisphere 34.9
2848 Male, age 76, right hemisphere 32.8
2521 Female, age 94, right hemisphere 30.7
Subiculum
nTPM: 31.5
1977 Female, age 85, both hemispheres 36.9
1901 Male, age 80, both hemispheres 35.4
2042 Male, age 76, both hemispheres 32.6
2438 Female, age 94, left hemisphere 31.4
2729 Female, age 91, right hemisphere 26.5
2619 Male, age 74, both hemispheres 26.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 28.1
Min nTPM: 7.1
Std nTPM: 4.1
Median nTPM: 16.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 28.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 26.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 26.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 26.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 25.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 24.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 24.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 24.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 23.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.4
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 56.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.8
Pig sample Sample description nTPM
Subiculum
nTPM: 30.7
Samples: 4

Max nTPM: 34.5
Min nTPM: 26.9
Sample A Female 34.5
Sample B Female 28.9
Sample C Male 26.9
Sample D Male 32.3
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 40.6
Min nTPM: 28.5
Sample A Female 40.6
Sample B Female 36.0
Sample C Male 34.3
Sample D Male 28.5
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 34.1
Min nTPM: 25.2
Sample A Female 34.1
Sample B Female 32.8
Sample C Male 27.4
Sample D Male 25.2
Ventral hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 25.9
Sample A Female 37.8
Sample B Female 25.9
Sample C Male 26.4
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.1
Samples: 4

Max nTPM: 47.8
Min nTPM: 41.4
Sample A Male 42.9
Sample B Male 47.8
Sample C Female 41.4
Sample D Female 44.2
Hippocampal formation
nTPM: 40.9
Samples: 4

Max nTPM: 42.6
Min nTPM: 39.6
Sample A Male 42.6
Sample B Male 39.6
Sample C Female 41.1
Sample D Female 40.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
71378309 Antisense, RP_050426_03_E07, Mouse strain C57BL/6J (56 days, male) 3.5

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