HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:20.3 nTPM
HPA Brain:26.0 nTPM
GTEx:20.3 nTPM
FANTOM5:58.1 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:75.4 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042372
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
1898 Male, age 80, left hemisphere 29.4
1855 Male, age 76, left hemisphere 23.6
2529 Female, age 94, left hemisphere 23.1
2621 Female, age 67, right hemisphere 21.8
2148 Female, age 91, left hemisphere 20.9
1911 Female, age 85, right hemisphere 17.8
Dentate gyrus
nTPM: 24.1
2010 Male, age 76, both hemispheres 26.9
2528 Male, age 74, both hemispheres 25.9
2530 Female, age 94, left hemisphere 24.7
1927 Female, age 91, both hemispheres 23.9
2246 Female, age 85, both hemispheres 23.3
2531 Female, age 67, both hemispheres 20.0
Entorhinal gyrus
nTPM: 21.7
2764 Male, age 80, right hemisphere 23.5
2613 Female, age 94, left hemisphere 22.2
1787 Male, age 76, left hemisphere 22.0
1938 Female, age 85, left hemisphere 21.8
2117 Female, age 91, right hemisphere 20.2
2686 Male, age 75, right hemisphere 20.2
Hippocampus, CA1
nTPM: 26.0
2749 Male, age 80, left hemisphere 37.1
1873 Female, age 85, both hemispheres 24.8
2045 Male, age 76, both hemispheres 24.5
2527 Male, age 74, both hemispheres 23.2
2082 Female, age 91, right hemisphere 20.4
Hippocampus, CA2
nTPM: 24.3
1892 Male, age 76, both hemispheres 30.9
1963 Male, age 80, left hemisphere 26.6
2249 Male, age 74, both hemispheres 25.2
2437 Female, age 94, left hemisphere 21.8
2113 Female, age 91, right hemisphere 21.1
1940 Female, age 85, left hemisphere 19.9
Hippocampus, CA3
nTPM: 23.4
1867 Male, age 76, both hemispheres 26.9
2137 Male, age 80, left hemisphere 26.0
2436 Male, age 74, both hemispheres 24.2
1891 Female, age 85, both hemispheres 23.2
2620 Female, age 94, left hemisphere 21.6
2861 Female, age 67, both hemispheres 18.6
Parahippocampal cortex
nTPM: 21.7
1850 Male, age 80, both hemispheres 27.2
1990 Female, age 91, right hemisphere 23.7
2692 Male, age 74, both hemispheres 23.6
2532 Female, age 72, left hemisphere 21.9
1933 Female, age 85, both hemispheres 21.8
2245 Female, age 91, both hemispheres 21.2
2250 Female, age 67, right hemisphere 21.1
2018 Male, age 76, both hemispheres 20.5
2622 Female, age 67, right hemisphere 18.4
2693 Female, age 94, both hemispheres 17.4
Perirhinal gyrus
nTPM: 25.2
1847 Female, age 91, left hemisphere 29.3
1794 Male, age 80, right hemisphere 27.7
1841 Female, age 85, right hemisphere 26.8
2848 Male, age 76, right hemisphere 21.2
2521 Female, age 94, right hemisphere 21.1
Subiculum
nTPM: 22.0
1901 Male, age 80, both hemispheres 24.0
1977 Female, age 85, both hemispheres 23.0
2042 Male, age 76, both hemispheres 22.4
2619 Male, age 74, both hemispheres 22.1
2438 Female, age 94, left hemisphere 20.6
2729 Female, age 91, right hemisphere 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 35.7
Min nTPM: 9.5
Std nTPM: 4.9
Median nTPM: 19.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 35.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 35.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 34.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 31.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 30.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 30.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 30.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 29.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 29.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 28.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.1
FF:10169-103B7 60 years, female 64.3
FF:10153-102I9 76 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 21.0
Min nTPM: 16.1
Sample A Female 21.0
Sample B Female 17.2
Sample C Male 16.4
Sample D Male 16.1
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.7
Sample A Female 26.7
Sample B Female 20.0
Sample C Male 19.2
Sample D Male 16.7
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 23.4
Min nTPM: 14.8
Sample A Female 18.8
Sample B Female 23.4
Sample C Male 18.8
Sample D Male 14.8
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.6
Sample A Female 20.3
Sample B Female 15.6
Sample C Male 19.5
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 78.4
Min nTPM: 70.1
Sample A Male 70.7
Sample B Male 72.8
Sample C Female 78.4
Sample D Female 70.1
Hippocampal formation
nTPM: 75.4
Samples: 4

Max nTPM: 76.9
Min nTPM: 72.2
Sample A Male 76.9
Sample B Male 72.2
Sample C Female 76.5
Sample D Female 75.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
67978660 Antisense, RP_040923_01_D12, Mouse strain C57BL/6J (56 days, male) 3.3

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